Transcript Information: R_Transcript_78753.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value1.2E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.945262169405
Replicate 212.429809846448
Replicate 313.194280855384
Condition 2: 8 Hour
Replicate 111.01863922626
Replicate 212.07487619424
Replicate 313.069159646679
Condition 3: 24 Hour
Replicate 114.968490312463
Replicate 212.792050156535
Replicate 314.402109683978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78753.p1 GENE.R_Transcript_78753~~R_Transcript_78753.p1 ORF type:complete len:500 (+),score=108.72,Tocopherol_cycl|PF14249.2|1.7e-143 R_Transcript_78753:257-1756(+)
ATGGCTTTTGCAGCACCAACTCACTTCCCATTGGGACTATCATCATCAACAACAACAACAACAAAAACGTCTCCGTTGAAGAACAAATTACCGTTTTGCAATCCTTCAAATTTGGGCCTTCAATTAACTACCAGGAAACCCAATTTCTTCTCTCAATCTTCAATGGAGTCAACTGGGTCTTCTTCAGATTCTTCTGTGGCTGTTGAGGAGAAGAAAAATGGTTCTGTAACACCCATTTATGAGCCCACACCTCCTAAACGACCACTTCGGACACCTCATAGCGGGTACCATTTTGATGGGAACACCAGGCAATTTTTTGAGGGGTGGTATTTTAAGGTCTCAATTCCGGAGAAGAAGCAAAGTTTTTGCTTCATGTATGTTGTTGAGAATCCTGCATTCAAAAAGAAATTGACCCCTGCTGAAGAAGCCAAGTATGGTCGCCGTTTCACTGGAACTGGGGCTCAGATTCTAGGTGCTGATGACAAGTACATTTGCCAATACTGTGAAGAATCACATAACTTTTGGGGAAGCAGGCATGAACTAAGTCTGGGAAACACCTTCAAGGCCAGTGAAGGTTCGCAGCCTCCAAACAAAGAGGTTCCTCCAGAGGAGTTTAATAGAAGAGTTACAGAAGGTTATCAAGTGACCCCACTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGTCAGATTTTGCTGAGATAGTGAAAACAGCTCGTTGGGAGTATAGTACCCGACCTGTATTTGGCTGGGGTAATGTCAGTTCTAAACAGAAATCAACTGCAGGTTGGTTTGCAGCTTTACCTGTTTTTGAACCTCACTGGCAAATATGCATGGGAGGGGGACTATCAACAGGTTGGATAGAGTGGGATGGTGAGAGGTTTGAGTTTGAGAATGCTCCTTCTTATTCGGAAAAGAACTGGGGAGGAGGCTTTCCCAGAAAGTGGTTTTGGGTCCAATGTAATGTCTTTGAGGGTGCAAAAGGAGACATTACTTTGACTGCAGCTGGAGGGTTGAGGGAGCTTCCCAGAAATAACATTGAAAATGCAGCATTGGTCGGAGTCCACTACTCTGGGGTATTCTATGAATTTGTGCCGTGGAATGGGGATGTTGAGTGGGAGATCACTCCATGGGGTTACTGGAAAATCTGTGCGGATAATGGTTCATACAAGGTAGAATTGGAGGCAAGAACAGAGCATTCTGGTACACCCTTGCGTGCTCCTACACCGCAAGATGGTTTTGTTCCATTTTGTAAAGATACTTGTTTTGGTGAACTAAAATTGCAACTTTGGGAACGAAGATCAGACGGCAGCAAAGGAAAGGTTATTTTGGACGCGACAAGTCAGATGGCGGCACTTGAAGTTGGTGGTGGACCGTGGTTCGAGACATGGAAAGGAAAAACCGCGACACCAGAGATATTGAATCTTGCTCTTAAGGCTCCCATCGATGTGGAATCTGTTTTCAGTTGGGTTCCATTTCTGAAACCCCCTGGTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78753.p1 GENE.R_Transcript_78753~~R_Transcript_78753.p1 ORF type:complete len:500 (+),score=108.72,Tocopherol_cycl|PF14249.2|1.7e-143 R_Transcript_78753:257-1756(+)
MAFAAPTHFPLGLSSSTTTTTKTSPLKNKLPFCNPSNLGLQLTTRKPNFFSQSSMESTGSSSDSSVAVEEKKNGSVTPIYEPTPPKRPLRTPHSGYHFDGNTRQFFEGWYFKVSIPEKKQSFCFMYVVENPAFKKKLTPAEEAKYGRRFTGTGAQILGADDKYICQYCEESHNFWGSRHELSLGNTFKASEGSQPPNKEVPPEEFNRRVTEGYQVTPLWHQGFIRDDGRSDFAEIVKTARWEYSTRPVFGWGNVSSKQKSTAGWFAALPVFEPHWQICMGGGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWFWVQCNVFEGAKGDITLTAAGGLRELPRNNIENAALVGVHYSGVFYEFVPWNGDVEWEITPWGYWKICADNGSYKVELEARTEHSGTPLRAPTPQDGFVPFCKDTCFGELKLQLWERRSDGSKGKVILDATSQMAALEVGGGPWFETWKGKTATPEILNLALKAPIDVESVFSWVPFLKPPGL*

Click here to download the sequence:
Link to NCBI Protein BLAST