Transcript Information: R_Transcript_78754.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value1.2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8789812747505
Replicate 20.46315368565363
Replicate 30.67372757635742
Condition 2: 8 Hour
Replicate 11.2603018722847
Replicate 20.49325474649674
Replicate 31.334677251499
Condition 3: 24 Hour
Replicate 10.50642221825818
Replicate 20.81085510627122
Replicate 31.6093900505072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78754.p1 GENE.R_Transcript_78754~~R_Transcript_78754.p1 ORF type:3prime_partial len:136 (+),score=27.25,Tocopherol_cycl|PF14249.2|2.8e-11 R_Transcript_78754:257-661(+)
ATGGCTTTTGCAGCACCAACTCACTTCCCATTGGGACTATCATCATCAACAACAACGTCTCCGTTGAAGAAGAAATTACCCTTTTGCAATCCTTCAAATTTGGGCCTTCAATCAACTACCAGGAAACCCATTTTCTTTGCTCAATCTTCAATGGAGTTAACTAGGTCTTCTTCAGATTCTTCTGCGGCTGTTGAGGAGAAGGAAAATGGTTCTGTAACACCCATTTATGAGCCCACACCTCCTAAACGACCACTTCGGACACCTCATAGCGGGTACCATTTTGATGGGAACACCAGGCAATTTTTTGAGGGGTGGTATTTTAAGGTCTCAATTCCGGAGAAGAAGCAAAGTTTTTGCTTCATGTATGTTGTTGAGAATCCTGCATTCAAAAAGAAATTGACCCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78754.p1 GENE.R_Transcript_78754~~R_Transcript_78754.p1 ORF type:3prime_partial len:136 (+),score=27.25,Tocopherol_cycl|PF14249.2|2.8e-11 R_Transcript_78754:257-661(+)
MAFAAPTHFPLGLSSSTTTSPLKKKLPFCNPSNLGLQSTTRKPIFFAQSSMELTRSSSDSSAAVEEKENGSVTPIYEPTPPKRPLRTPHSGYHFDGNTRQFFEGWYFKVSIPEKKQSFCFMYVVENPAFKKKLTP

Click here to download the sequence:
Link to NCBI Protein BLAST