Transcript Information: R_Transcript_78788.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value7E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5709095500052
Replicate 22.1525618914188
Replicate 33.2723910851646
Condition 2: 8 Hour
Replicate 14.1564241339021
Replicate 23.4198995757107
Replicate 36.1623955383499
Condition 3: 24 Hour
Replicate 15.8648515943042
Replicate 23.5955632140941
Replicate 34.3775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78788.p1 GENE.R_Transcript_78788~~R_Transcript_78788.p1 ORF type:internal len:595 (+),score=125.55,SHR-BD|PF06650.8|3.1e-21 R_Transcript_78788:1-1782(+)
GAGTGCCTAAAGGCTAAGCCATTCATGTATTCTCCTGACCCAGGTGTTGCTGCTAGTGAAATTATGGTTCGAGTAAGCAGGTGCCGCACTGAATGTACCATAGAGAATTTACCTAGCACTTCATGGTCAAACTCATTTTTTCTTGTTGCACCTAGTGGATCCACTACGGTTTTGGTCCCACAGCCATCGTCAAATTCTGCAGCTGTTATATCAGTGACCTCACAGTTACTCGATGGCCCGCTGACAGGACGGACAAGAGCCATTACATTCCAGCCAAGATATGTTATCAGTAATGCATGCAGCAAGCCATTGTGTTATAAACAAAAGGGTACCAAAGTCACTTTCCATTTAGGTGTTGGACAACACTCTCATTTGCATTGGATCGACACAAGAAGGGAGTTACTTGTTGCTGTCCGTTTTGTTGAACCTGGATGGCAATGGTCAGGCAGTTTCCTACCTGATCATCTTGGTGACGCACAAGTGAAAATGCGTAATTATGATACTGGTGCGTTGAGAATTATAAGAGTGGAAGTACAGAATGCTGATATTATTCGAGATGAAAAGATTGTTGGTAATACCATTGGAAATTCAGGGACAATTTTCATCCTTCTGTCAGATGATGACACAGGATTTGTCCCATACAGAGTTGATAATTTTTCAAATGAGGTTCCTGGGGAACGCATAGTAGGATCATATATTCTTGATGATGTCAAGGAATATGCACCTGTACACTTGTCATCTTCATTGTCATTAGAGAAGCAGGAGAGGACATTGCTTTCATCGGTCCATGCAGAGGGTGCAATGAAGGTGCTCTGTATCTTTGATTCAAGCTGTCATGTTTTGGGAGAGCTGAAGAACTCAAGTTCTCTAACATTTCGCAAGAAGAGTGAAAGTAAAGAAGTGGAGGAGAATTTGAATGATTATGAGGAGAAAATCTCTGTCAGTGTATCCTATATTGGTGTCTCTTTAATAGATTCACATCCTCAGGAGTTGCTTTATGCTTCCATAGAGGACATAAAAGTTGATCTTCTCCAGAGTGTGAAGCAACAGAGGTTTTCCTTTCAAGTTGCATCCTTGCAAATTGACAATCAACTGCGTGGTACCCCATATCCTGTCATCTTGTCCTTCCATGAAGACTACAAAGGCAGCCTAGTTAGCCAAGTGAGAAATAAAGATGGAGGAAGAATGAGCAAATTTGAAAGCATGATCCCTTATGTTTCTGGGGGATCACATGAACCAGTATTTTGTTTTGTGGCTTCAAAATGGAGGAACAATGAGATGGCATTGGTTTCATTTGAAAATATTAGCTTAAGGATTGCTGAACTTTCCCTTGAGCTTGATCTGGAGCTTCTTTTGAAATTACTTGACTTTTGTAAGGCAAACCCTTTACTGAAGACCGAGATGCCAATTTCAATGTCCAGAGTTGATTCTTATGCACACAAGCTGGGAGTAGTGGATATATCTTGCTCTGTTGCATTGCAAGATTCACAACGCTTGCTTCGAAATGGAGACCTTCAGCTTCCAAAGATCGATTGTCCACCTCCTGATTGCCACCACAGTAATCCATCATTGCCAGAGATAGCTCCAATTGGAGCTCCTTTGCAGAAAATTTACCTTCTCGCAAGAAGACAAAACAAGATATATGTGGAATCCTTTTCTTTGGCCCCTGTTAAGGTTACTTTGAGTTTTTCAAGCAATCCATGGATGCTCAAAAAGGGGGGTTTGACATCAGGAGAGTCTTTCATCCATAGGGGTATTATGGCTTTCGCTGATGTTGAGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78788.p1 GENE.R_Transcript_78788~~R_Transcript_78788.p1 ORF type:internal len:595 (+),score=125.55,SHR-BD|PF06650.8|3.1e-21 R_Transcript_78788:1-1782(+)
ECLKAKPFMYSPDPGVAASEIMVRVSRCRTECTIENLPSTSWSNSFFLVAPSGSTTVLVPQPSSNSAAVISVTSQLLDGPLTGRTRAITFQPRYVISNACSKPLCYKQKGTKVTFHLGVGQHSHLHWIDTRRELLVAVRFVEPGWQWSGSFLPDHLGDAQVKMRNYDTGALRIIRVEVQNADIIRDEKIVGNTIGNSGTIFILLSDDDTGFVPYRVDNFSNEVPGERIVGSYILDDVKEYAPVHLSSSLSLEKQERTLLSSVHAEGAMKVLCIFDSSCHVLGELKNSSSLTFRKKSESKEVEENLNDYEEKISVSVSYIGVSLIDSHPQELLYASIEDIKVDLLQSVKQQRFSFQVASLQIDNQLRGTPYPVILSFHEDYKGSLVSQVRNKDGGRMSKFESMIPYVSGGSHEPVFCFVASKWRNNEMALVSFENISLRIAELSLELDLELLLKLLDFCKANPLLKTEMPISMSRVDSYAHKLGVVDISCSVALQDSQRLLRNGDLQLPKIDCPPPDCHHSNPSLPEIAPIGAPLQKIYLLARRQNKIYVESFSLAPVKVTLSFSSNPWMLKKGGLTSGESFIHRGIMAFADVEG

Click here to download the sequence:
Link to NCBI Protein BLAST