Transcript Information: R_Transcript_78789.p2


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeHomolog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1706223838044
Replicate 20.68096109458264
Replicate 31.2382020322245
Condition 2: 8 Hour
Replicate 11.3235602674187
Replicate 20.84608742101783
Replicate 32.5510371682706
Condition 3: 24 Hour
Replicate 11.6132513187035
Replicate 21.3113937718722
Replicate 30.8281834205853


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78789.p2 GENE.R_Transcript_78789~~R_Transcript_78789.p2 ORF type:5prime_partial len:185 (+),score=22.11,zf-C3HC4|PF00097.21|5.2e-09,zf-C3HC4_3|PF13920.2|6.8e-09,zf-C3HC4_2|PF13923.2|2.8e-08,zf-RING_2|PF13639.2|2.7e-06,zf-C3HC4_4|PF15227.2|2e-05,zf-C3HC4_4|PF15227.2|2.9e+02,zf-RING_5|PF14634.2|1.1e-05 R_Transcript_78789:2-556(+)
TATGTTCTTATCCTTACATTCTCTCTGAAACTCTTTCGTCTTTTCCCACTTAAACCCAACAAATCCAAACAAGCCCTTCTGTTTTTACTCTCCTTTCCATTTCCCTCCCTTTTTCTCTCTTTTCACCGAACTTCAATTAGAGATAAAGATTCAACAATGGCGGAAACTTCCATTGGAGGTGCTTTGGTACCTTCAGTGAAAGCCGACTCTTCATCGGAGCCGGCGCCGATGGTGGAGGAAGAAAATTCCGGTGCCGGAAAATCAAATTCCGGCGGCAATGACGTGGACAGCGATCTACTTTGTCCAATTTGCATGCAGGTCATCAAGGATGCTTTTCTCACGGCTTGTGGTCATAGCTTTTGCTATATGTGCATTTCTACTCACCTTCGTAATAAGAGTGATTGTCCTTGCTGTAGTCGCTTTCTCTCTACTAGCTTGATCTTCCCTAATTTCGCTCTTGACAAGTTATTGAAGAAGCTGTCTGGTCGTCAATTTGCCATCAGGGCCTCATCTAGTGAATACCTTCGTCTATCATTACAGCAGACAGGGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78789.p2 GENE.R_Transcript_78789~~R_Transcript_78789.p2 ORF type:5prime_partial len:185 (+),score=22.11,zf-C3HC4|PF00097.21|5.2e-09,zf-C3HC4_3|PF13920.2|6.8e-09,zf-C3HC4_2|PF13923.2|2.8e-08,zf-RING_2|PF13639.2|2.7e-06,zf-C3HC4_4|PF15227.2|2e-05,zf-C3HC4_4|PF15227.2|2.9e+02,zf-RING_5|PF14634.2|1.1e-05 R_Transcript_78789:2-556(+)
YVLILTFSLKLFRLFPLKPNKSKQALLFLLSFPFPSLFLSFHRTSIRDKDSTMAETSIGGALVPSVKADSSSEPAPMVEEENSGAGKSNSGGNDVDSDLLCPICMQVIKDAFLTACGHSFCYMCISTHLRNKSDCPCCSRFLSTSLIFPNFALDKLLKKLSGRQFAIRASSSEYLRLSLQQTGL*

Click here to download the sequence:
Link to NCBI Protein BLAST