Transcript Information: R_Transcript_78790.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeOrtholog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value2.3E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6854572440921
Replicate 27.8091503302723
Replicate 35.7065907695678
Condition 2: 8 Hour
Replicate 19.7943459788981
Replicate 27.6105457494561
Replicate 310.062998168495
Condition 3: 24 Hour
Replicate 112.002502726063
Replicate 28.280395443129
Replicate 310.367860114846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78790.p1 GENE.R_Transcript_78790~~R_Transcript_78790.p1 ORF type:complete len:285 (+),score=43.66,WD40|PF00400.28|1.3e+02,WD40|PF00400.28|0.002,WD40|PF00400.28|2.1,WD40|PF00400.28|0.00058,WD40|PF00400.28|21,WD40|PF00400.28|1.4e+04 R_Transcript_78790:1919-2773(+)
ATGATATACATTGTGGACTCCATTGATCTCCAGGTGGTGGAGGAACCACAAAAAGTGCACTGTGCAATTGTTGACATTGCCACAAGATCCAAACTAAGCTGCTTAAGTTGGAATAAGTACACTAAACATTATATCGCCAGCAGTGATTATGAGGGGATTGTAACAGTTTGGGATGTTACCACCCGTCAGAGTGTTAGAGAATTTGAGGAGCATGAGAAACGAGCATGGAGTGTGGATTTTTCACTTGCAGAACCCTCACTGTTGGTATCTGGAGGAGATGACTGTAAGGTTAAAGTATGGTGCATGAAACAGGAAGAGAGTGTTCTTAACATCAACATGAAAGCAAATATTTGTTCTGTCAAGTGTAATCCTGGATCTAGCATGCATGTAGCGGTAGGCTCGGCAGATCATCATATTCACTATTATGACTTGAGAAATATTAGCCAACCTGTTCATGTCTTCGCTGGTCATAGAAAAACTGTTTCATACGTCAAATTCTTGTCAAGCCATGAGCTTGCTTCTGCTTCAACTGATAGTACGCTACGCTTGTGGGATGTGAGGGAAAATATACCGCTCCAAATTTACAGAGGACACATCAATGAGAAAAATTTCGTAGGTCTCTCAGCAAATAGTGAATACATTTCGTGTGGCAGTGAATCAAATGAGATTATTGTCTATCACAAGGCTATATCTGCACCAGTTGCTCGGTATAGCTTCAATAAATCAGAATTGGATGATGTAGATGAAGATAGAGGATCATACTTCACCAGTGCGGTGTGCTGGAAGAGTGATAGCCCGATCATCATGGCTGCTAACAGTCAAGGAAGTATTAGAGTACTTGCTCTGGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78790.p1 GENE.R_Transcript_78790~~R_Transcript_78790.p1 ORF type:complete len:285 (+),score=43.66,WD40|PF00400.28|1.3e+02,WD40|PF00400.28|0.002,WD40|PF00400.28|2.1,WD40|PF00400.28|0.00058,WD40|PF00400.28|21,WD40|PF00400.28|1.4e+04 R_Transcript_78790:1919-2773(+)
MIYIVDSIDLQVVEEPQKVHCAIVDIATRSKLSCLSWNKYTKHYIASSDYEGIVTVWDVTTRQSVREFEEHEKRAWSVDFSLAEPSLLVSGGDDCKVKVWCMKQEESVLNINMKANICSVKCNPGSSMHVAVGSADHHIHYYDLRNISQPVHVFAGHRKTVSYVKFLSSHELASASTDSTLRLWDVRENIPLQIYRGHINEKNFVGLSANSEYISCGSESNEIIVYHKAISAPVARYSFNKSELDDVDEDRGSYFTSAVCWKSDSPIIMAANSQGSIRVLALAP*

Click here to download the sequence:
Link to NCBI Protein BLAST