Transcript Information: R_Transcript_78794.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeOrtholog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value5E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.856233317429
Replicate 21.33451061968
Replicate 31.7471240539438
Condition 2: 8 Hour
Replicate 12.1788269656447
Replicate 22.6529859811576
Replicate 32.6919761513286
Condition 3: 24 Hour
Replicate 12.3346922604445
Replicate 21.3083628155427
Replicate 31.9476347390883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78794.p1 GENE.R_Transcript_78794~~R_Transcript_78794.p1 ORF type:5prime_partial len:236 (+),score=28.78,WD40|PF00400.28|1e+02,WD40|PF00400.28|0.0015,WD40|PF00400.28|1.6,WD40|PF00400.28|0.00043,WD40|PF00400.28|13 R_Transcript_78794:2-709(+)
GTGGAGGAACCACAAAAAGTGCACTGTGCAATTGTTGACATTGCCACAAGATCCAAACTAAGCTGCTTAAGTTGGAATAAGTACACTAAACATTATATCGCCAGCAGTGATTATGAGGGGATTGTAACAGTTTGGGATGTTACCACCCGTCAGAGTGTTAGAGAATTTGAGGAGCATGAGAAACGAGCATGGAGTGTGGATTTTTCACTTGCAGAACCCTCACTGTTGGTATCTGGAGGAGATGACTGTAAGGTTAAAGTATGGTGCATGAAACAGGAAGAGAGTGTTCTTAACATCAACATGAAAGCAAATATTTGTTCTGTCAAGTGTAATCCTGGATCTAGCATGCATGTAGCGGTAGGCTCGGCAGATCATCATATTCACTATTATGACTTGAGAAATATTAGCCAACCTGTTCATGTCTTCGCTGGTCATAGAAAAACTGTTTCATACGTCAAATTCTTGTCAAGCCATGAGCTTGCTTCTGCTTCAACTGATAGTACGCTACGCTTGTGGGATGTGAGGGAAAATATGCCGCTCCAAATCTACAGAGGACACATCAATGAGAAGAATTTCGTAGGTCTCTCAGCAAATAGTGAATACATTTCGTGTGGCAGTGAATCAAATGAGATTATTGTCTATCACAAGGTAATCCATTCTGAAATAGGGTATTTCTTTCATCATTTCTTTTGGTTATTTCAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78794.p1 GENE.R_Transcript_78794~~R_Transcript_78794.p1 ORF type:5prime_partial len:236 (+),score=28.78,WD40|PF00400.28|1e+02,WD40|PF00400.28|0.0015,WD40|PF00400.28|1.6,WD40|PF00400.28|0.00043,WD40|PF00400.28|13 R_Transcript_78794:2-709(+)
VEEPQKVHCAIVDIATRSKLSCLSWNKYTKHYIASSDYEGIVTVWDVTTRQSVREFEEHEKRAWSVDFSLAEPSLLVSGGDDCKVKVWCMKQEESVLNINMKANICSVKCNPGSSMHVAVGSADHHIHYYDLRNISQPVHVFAGHRKTVSYVKFLSSHELASASTDSTLRLWDVRENMPLQIYRGHINEKNFVGLSANSEYISCGSESNEIIVYHKVIHSEIGYFFHHFFWLFQV*

Click here to download the sequence:
Link to NCBI Protein BLAST