Transcript Information: R_Transcript_78798.p1


Annotated TAIR IDAT2G32950.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)COP1, ATCOP1, DET340, FUS1, EMB168
Annotation TypeOrtholog
Chromosome Positionchr2:13978000-13983282 | Forward length=675
E-Value3.2E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95440318717484
Replicate 20.2744614433503
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.87689732710532
Replicate 30.41523292268859
Condition 3: 24 Hour
Replicate 10.37512756908013
Replicate 20.72076009446331
Replicate 31.3590404870949


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78798.p1 GENE.R_Transcript_78798~~R_Transcript_78798.p1 ORF type:3prime_partial len:306 (+),score=50.28,WD40|PF00400.28|78,WD40|PF00400.28|1.5e+02,WD40|PF00400.28|0.0022,WD40|PF00400.28|2.3,WD40|PF00400.28|0.00064 R_Transcript_78798:1407-2321(+)
ATGATGCTATTGCTGGTTCAGAACAGCAACATCTGGCTCCATCAGGAAGATTTATGGCGAGGAACAGGCAAATTCATGCACAGTGAGTTGCAAGAGTGTTACCTGCAAAAACGGCGACACTGGGCGGAAAGATCTCATGCAGCAGAAGGAAGAGACATGAATGCTGCAAGTAGTTTAGGTTATCATGCTGGTCTGAAAGATTTCCAGTCTGTGCTCAGTAGCATTACTAGATACAGCCAATTGCGAGTTATTTCCGACCTGAGACATGGGGATGTTTTTCACTCAGCAAACATTATTTCAAGTATTGAGTTTGACAGAGATGATGAATTGTTTGCAACTGCTGGGGTGTCTAGACGGGTCAAAGTTTTTGAGTTCTCCTCTGTGGTGGAGGAACCACAAAAAGTGCACTGTGCAATTGTTGACATTGCCACAAGATCCAAACTAAGCTGCTTAAGTTGGAATAAGTACACTAAACATTATATCGCCAGCAGTGATTATGAGGGGATTGTAACAGTTTGGGATGTTACCACCCGTCAGAGTGTTAGAGAATTTGAGGAGCATGAGAAACGAGCATGGAGTGTGGATTTTTCACTTGCAGAACCCTCACTGTTGGTATCTGGAGGAGATGACTGTAAGGTTAAAGTATGGTGCATGAAACAGGAAGAGAGTGTTCTTAACATCAACATGAAAGCAAATATTTGTTCTGTCAAGTGTAATCCTGGATCTAGCATGCATGTAGCGGTAGGCTCGGCAGATCATCATATTCACTATTATGACTTGAGAAATATTAGCCAACCTGTTCATGTCTTCGCTGGTCATAGAAAAACTGTTTCATACGTCAAATTCTTGTCAAGCCATGAGCTTGCTTCTGCTTCAACTGATAGTACGCTACGCTTGTGGGATGTGAGGGAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78798.p1 GENE.R_Transcript_78798~~R_Transcript_78798.p1 ORF type:3prime_partial len:306 (+),score=50.28,WD40|PF00400.28|78,WD40|PF00400.28|1.5e+02,WD40|PF00400.28|0.0022,WD40|PF00400.28|2.3,WD40|PF00400.28|0.00064 R_Transcript_78798:1407-2321(+)
MMLLLVQNSNIWLHQEDLWRGTGKFMHSELQECYLQKRRHWAERSHAAEGRDMNAASSLGYHAGLKDFQSVLSSITRYSQLRVISDLRHGDVFHSANIISSIEFDRDDELFATAGVSRRVKVFEFSSVVEEPQKVHCAIVDIATRSKLSCLSWNKYTKHYIASSDYEGIVTVWDVTTRQSVREFEEHEKRAWSVDFSLAEPSLLVSGGDDCKVKVWCMKQEESVLNINMKANICSVKCNPGSSMHVAVGSADHHIHYYDLRNISQPVHVFAGHRKTVSYVKFLSSHELASASTDSTLRLWDVREN

Click here to download the sequence:
Link to NCBI Protein BLAST