Transcript Information: R_Transcript_78826.p1


Annotated TAIR IDAT1G24310.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 2922 Blast hits to 2454 proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa - 1043; Fungi - 654; Plants - 388; Viruses - 11; Other Eukaryotes - 769 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8624192-8626179 | Forward length=377
E-Value3.2E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.743734593524
Replicate 223.173336173748
Replicate 324.437372135987
Condition 2: 8 Hour
Replicate 119.859503367351
Replicate 218.805810765052
Replicate 323.714200971796
Condition 3: 24 Hour
Replicate 130.363551494705
Replicate 228.661672843976
Replicate 331.570744548382


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78826.p1 GENE.R_Transcript_78826~~R_Transcript_78826.p1 ORF type:5prime_partial len:434 (+),score=86.38,Nup54|PF13874.2|1.6e+04,Nup54|PF13874.2|1.8e-28,Nup54|PF13874.2|7.3e+03 R_Transcript_78826:2-1303(+)
CCCCCTCTCTCTCTCTCTGCCTCCTCTCCTCATCGAAAAACCCCTCTCTCTCTCTCCTCCCCTAAACCCCCAATTCCAAACCCAACCCCTCACAAGTCACAACACTTCCTTCCTTCCTTCTCAAACTCCATTCTCAAAATGTTCGGTTCCTCGTCATCTTCGCTCTTCGGAACTCCATCCTCAACACCAGCCTTCGGAACTCCGTCCTCAACTCCGGCCTTCGGAACTTCAACGCCGTCAACAACACCAGCATTCGGCACTCCCTCCACTCCTCTCTTCGGTTCTTCTCTCTTCAACACTCCGTCTCCTTTCCCCCAATCTCAACCACAACCACAACAACAACAACAACAACAACAGCAAACGTCGCCGTTTCAACCTAGCACTGGATTCGGTTTCCAAACGACGCCGTTCGGCTCTCAACAACAACAACAGCAACAACCACAACAACAGCAACCACAAATGACGCCGTTTCCCGGTGTTGCTCAGCAACAGCTCACCACTCAGATGGCTCCTGTCGCTCCTTTGCCTTTCTCCCTCGCTGAGCGTGACATTCAAGCTATTGTTGATGCGTACAAGGACGAGCTTGGTAATCCGAAGTATGCTTTCAAGCATTTGTTATTTAGCGTAACTGAACCACAATTTCGGGTCAAGCCAGCTGGCGTATCAGATATAATGTGGGCTGAAGCAATGGGGAAACTTGAGGGAATGGATAGTGCAAATCATGAGCGATTGTGGCCTCAGCTTGTAAAAGGTTTTAAGGATCTTTCACACCGTTTAAAGCTTCAAGATGAAGTCATTGTTTCAGATGGCGAGAGATTGCGAATGACCCAAAGCAATGTGAAGACGCTTCAAAGGCACTTCCAAGCTGACACTCTACCTCGAATTGAAAGGTTGAGACAGAAAGAGCAAGGTCTTCAACGACGTTTGCTGAGGGTGATGAGAATCGTAGAGGCTCTGGAGGGAAAAGGTTGCAGATTACCACTTATGAAAGGGGAAGTTGAATTGGCTGAGAACTTGGCTGTTATCATTAGACAGCTTAAAGGGTCTGGGGCAGAACTTTCAAGAAGAGTCCAAAATCTGCTGACTGTATCTCGTGTTCAGGCAAATGCCAGTGGTGGTAGTGTCTCCATTTATCTTCCAGGTTCAACAAAAATACATGAGCGAAGTCTTGCCGACATGCAGGAGGTTCTGCAGCAGCAGACTGGGGCAATAGCAAGACTTGGCAATGTGTTGAAGAGAGACGTTAGGGACATGGAGATTATAATGGCTGAAGACACTGAAATGATTGAAGATGGTAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78826.p1 GENE.R_Transcript_78826~~R_Transcript_78826.p1 ORF type:5prime_partial len:434 (+),score=86.38,Nup54|PF13874.2|1.6e+04,Nup54|PF13874.2|1.8e-28,Nup54|PF13874.2|7.3e+03 R_Transcript_78826:2-1303(+)
PPLSLSASSPHRKTPLSLSSPKPPIPNPTPHKSQHFLPSFSNSILKMFGSSSSSLFGTPSSTPAFGTPSSTPAFGTSTPSTTPAFGTPSTPLFGSSLFNTPSPFPQSQPQPQQQQQQQQQTSPFQPSTGFGFQTTPFGSQQQQQQQPQQQQPQMTPFPGVAQQQLTTQMAPVAPLPFSLAERDIQAIVDAYKDELGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMDSANHERLWPQLVKGFKDLSHRLKLQDEVIVSDGERLRMTQSNVKTLQRHFQADTLPRIERLRQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKGEVELAENLAVIIRQLKGSGAELSRRVQNLLTVSRVQANASGGSVSIYLPGSTKIHERSLADMQEVLQQQTGAIARLGNVLKRDVRDMEIIMAEDTEMIEDGS*

Click here to download the sequence:
Link to NCBI Protein BLAST