Transcript Information: R_Transcript_78831.p1


Annotated TAIR IDAT5G21090.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7164758-7166904 | Forward length=218
E-Value1.8E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1130.47486904669
Replicate 283.207560909033
Replicate 383.673222052612
Condition 2: 8 Hour
Replicate 152.485904956363
Replicate 263.355831883359
Replicate 374.119076699914
Condition 3: 24 Hour
Replicate 1108.30558131959
Replicate 279.337667398049
Replicate 3113.59313404635


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78831.p1 GENE.R_Transcript_78831~~R_Transcript_78831.p1 ORF type:complete len:216 (+),score=34.95,LRRNT_2|PF08263.8|6.2e-12,LRR_8|PF13855.2|3e-05,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|6.2e+02,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|18,LRR_1|PF00560.29|0.075,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.004,LRR_4|PF12799.3|0.03,LRR_4|PF12799.3|0.033 R_Transcript_78831:296-943(+)
ATGGCAAGTTGCGCAATCGTCCTTGTAATTACCCTCCTTTCTTTAACTTCAACTCCTTCCACAATTGCTAACTCAGAAGGAGATGCTTTGTATGCACTGAGGAGAGCTGTGGTGGACCCTGGAAATGTGTTGCAAAGCTGGGATCCGACCCTTGTTGATCCTTGTACTTGGTTCCATGTTACCTGTGACCACGATAACCGGGTCACCCGCCTGGATCTTGGCAATGCAAAGCTCTCAGGGAAGTTAGTTCCAGAGCTGGGAAAGCTTGAGCGCCTTCAATATCTGGAACTCTACATGAACAATTTTGTGGGCCACATACCAAAGGAGCTTGGTGGTCTCAAGAGCCTTGTCAGCTTAGACTTGTTCCACAACAATCTAACTGGTCCTATTCCTGCTTCACTATCCAAGCTCTCCAACCTAAAGTTCATGCGATTGAACGACAACAAGCTGACCGGAAGAATACCCAGAGAGCTTACCAAGCTCGGAAGCCTTAAGATCTTAAATGTGTCGAACAATAACTTGTGTGGTACCATTCCAACTTCTGGTTCCTTCTCGAAGTTTACTCAAGAAAGTTTTGCGAACAATCCTAAGCTGGAAGGACCTGAACTTTTAGGATTTGTGCGATATGACTCTGGAAGAGCCTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78831.p1 GENE.R_Transcript_78831~~R_Transcript_78831.p1 ORF type:complete len:216 (+),score=34.95,LRRNT_2|PF08263.8|6.2e-12,LRR_8|PF13855.2|3e-05,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|6.2e+02,LRR_1|PF00560.29|5.5e+02,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|18,LRR_1|PF00560.29|0.075,LRR_4|PF12799.3|0.51,LRR_4|PF12799.3|0.004,LRR_4|PF12799.3|0.03,LRR_4|PF12799.3|0.033 R_Transcript_78831:296-943(+)
MASCAIVLVITLLSLTSTPSTIANSEGDALYALRRAVVDPGNVLQSWDPTLVDPCTWFHVTCDHDNRVTRLDLGNAKLSGKLVPELGKLERLQYLELYMNNFVGHIPKELGGLKSLVSLDLFHNNLTGPIPASLSKLSNLKFMRLNDNKLTGRIPRELTKLGSLKILNVSNNNLCGTIPTSGSFSKFTQESFANNPKLEGPELLGFVRYDSGRAC*

Click here to download the sequence:
Link to NCBI Protein BLAST