Transcript Information: R_Transcript_78948.p1


Annotated TAIR IDAT5G08630.1
Annotated Gene NameDDT domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2798575-2802138 | Reverse length=723
E-Value1.4E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9954981238127
Replicate 24.7816392188942
Replicate 36.7549795539019
Condition 2: 8 Hour
Replicate 15.4691056013555
Replicate 25.4841286851375
Replicate 37.2076468448836
Condition 3: 24 Hour
Replicate 19.3506981263204
Replicate 27.9527721839016
Replicate 36.9976749290956


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_78948.p1 GENE.R_Transcript_78948~~R_Transcript_78948.p1 ORF type:complete len:685 (+),score=154.59,WAC_Acf1_DNA_bd|PF10537.5|1e-28,DDT|PF02791.13|4.1e-17,WHIM3|PF15614.2|3.8e+02,WHIM3|PF15614.2|5.3e-16,WHIM2|PF15613.2|6e-06 R_Transcript_78948:276-2330(+)
ATGCCGTTGCTGAAAAGAAAGCCTTTCACATTGTTGGAACCGCCCAATGATCTAGAGCCCCGTGAGCTTGTGTTTCAAGTTCGGTTCACCAAGGAGATTTTCCGGGATTATCAAGAGTACTTGAAGCGGATTAATTTGTATCGCCAAAGACTTTGGACATGTAAAGTTACTGGCAAAACTAATTTGACATACGAGGAGGCTTTAGTCTCGGAGCAGCGTGCAGCAGAGAAGGTTCAGCAATTTCCTGAAGACTTCATTGAGCCAGTACTGAAAATTATTCAATACAGTATGCTCCCACTTAGTGATTTAGTTCGCAAAATTAAAACAGACCTGCAAGAGAGCCTCGTTGAGGGTGCAGAGCTGTATGGGAAGAAGGATGGTCAATCACATGCTTGCAAGATAGTGAAAATTTTAGAGGAGGAGGTAGGCAAAGCCCAGTATGAGGTAGCATGGCTTGATGATGATGATAAGATGGATGGAAATGCAGTGTTAGGAGAAGAAGATCTGATTCGTAAAAAACTTCCATTTGGTAGAGAGGTTCTAAAATCTTATATTAGGGAGTCCACATATCGTAGTCTCCCTTGGGTAATCCACAATAAACTGGCATTGAAGTACAGAATTCCTATTGATCCACCAGAAGATGTAAAAAGCAAAATATCCTTCCTGAATGGATGTGTGGTGAATAACAAGAAGAGAAAGAAAAGCGAGGAGGGAATTGCGGGGAAGCTTAAAAAGTGCAAACTTGGAAAGGGGAAATCTGATGGTCCCACCAGTGATAATGATTTGGAAAATGGAGATGATTCCATCAGGTATCCAATTGAAGACCAGCTCGTACAGCCCGGTGCTGATGATCCAGCTTTCACAGACCGCCCTTCCCCCATGAGAGACTTCAGCATCCCTTTGGATTGTGTTGGAGAGCTTTTGATGGTTTGGGATTTTTGTTCTTCTTTCGGTAGGATGCTGTACTTGTGGCCGTTTCCTCTTGAAGATTTTGAGAAGGCACTATGCCACAAAGACAGCAATCTAGCTATTGTCGTGGAAACCCATGCAGCTCTTCTTCGCTTGCTTATAAAAGAAGAGGGAGAATATTACATGCTTTGTCAGAAAAAGAAGCGTAAATCGAAGATTAGCTTAATTACTTGGACAGATTATCTATGTGATTTTCTGGAAATGATTGGCGATTCCGAGTTGGCAAGTCACATAGGAACCATAAAGCGGGGCCATTATGGCCTATTAGACATTCGGATCAAGTTGAGTATCTTAAAAGAATTGATTGACCAAGCCACTGCCACAAATCTTGTGAGGGAGAAGTTAGATGAGTATCTTGAACAACGACATGCACTTGCTGCTTCAAAAAGAGGAGAAGCATTAGAAGAAGGTAAGAAAAAGAGAGAGGCCAAGGAACGTTTGAGGGCTGTCTCTGAACCCAACGGTGTAGCGGTGGAGGATAATCCCGATGATGACGAAGACATTACAGGTGTATCTGGGAATGATGGTAAAAGTTTGGAGAATGGAAATATTATGGAGAAATCATCATCTGATCACAACCATTTGTTAGCAAACGGTGAGAGTGACCATCAAGGCGGTGGACTGCGGGAAAAAACAAAGAAGCTATTGGAAGAACTAGAAAAGAGTAAAGAACAAAGGAAAGAATTTCTCGAGAGGGAAATGGAGAAACGAGTTATTCGCACCAACCCCTTGGGTAAAGATAGAGATTATAATAGATATTGGTTTTTCCGGCGTGATGGCAGAGTATTTATTGAAAGCTCTGACTCAAAGCAATGGGGCTACTTTAGCAGCAAGGAAGAGCTTGATGCACTTGTAGGCGCCTTGAACACGAAAGGGATGAGAGAACGGGCTCTCAAGAAGCAACTTGAAAAGCATTATTCTAGAATATGCAAGGAGTTGCAAAAGAGATGCAAGGACATTGCCCAGAAAGTTGCAATCGAAGATGCAGTGGTTAGAAGGTCCACAAGGGTCCGAGCTTCTCCCAAGGATAATCCTGCACTCGCATTCCTCAAGTATTCAAACAAGTGGAAGGTTTTGATGGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_78948.p1 GENE.R_Transcript_78948~~R_Transcript_78948.p1 ORF type:complete len:685 (+),score=154.59,WAC_Acf1_DNA_bd|PF10537.5|1e-28,DDT|PF02791.13|4.1e-17,WHIM3|PF15614.2|3.8e+02,WHIM3|PF15614.2|5.3e-16,WHIM2|PF15613.2|6e-06 R_Transcript_78948:276-2330(+)
MPLLKRKPFTLLEPPNDLEPRELVFQVRFTKEIFRDYQEYLKRINLYRQRLWTCKVTGKTNLTYEEALVSEQRAAEKVQQFPEDFIEPVLKIIQYSMLPLSDLVRKIKTDLQESLVEGAELYGKKDGQSHACKIVKILEEEVGKAQYEVAWLDDDDKMDGNAVLGEEDLIRKKLPFGREVLKSYIRESTYRSLPWVIHNKLALKYRIPIDPPEDVKSKISFLNGCVVNNKKRKKSEEGIAGKLKKCKLGKGKSDGPTSDNDLENGDDSIRYPIEDQLVQPGADDPAFTDRPSPMRDFSIPLDCVGELLMVWDFCSSFGRMLYLWPFPLEDFEKALCHKDSNLAIVVETHAALLRLLIKEEGEYYMLCQKKKRKSKISLITWTDYLCDFLEMIGDSELASHIGTIKRGHYGLLDIRIKLSILKELIDQATATNLVREKLDEYLEQRHALAASKRGEALEEGKKKREAKERLRAVSEPNGVAVEDNPDDDEDITGVSGNDGKSLENGNIMEKSSSDHNHLLANGESDHQGGGLREKTKKLLEELEKSKEQRKEFLEREMEKRVIRTNPLGKDRDYNRYWFFRRDGRVFIESSDSKQWGYFSSKEELDALVGALNTKGMRERALKKQLEKHYSRICKELQKRCKDIAQKVAIEDAVVRRSTRVRASPKDNPALAFLKYSNKWKVLMG*

Click here to download the sequence:
Link to NCBI Protein BLAST