Transcript Information: R_Transcript_79036.p1


Annotated TAIR IDAT5G46850.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19010714-19012010 | Forward length=325
E-Value8.3E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2492175294616
Replicate 24.048306289417
Replicate 34.4915171757162
Condition 2: 8 Hour
Replicate 14.3210349906903
Replicate 23.58066408568
Replicate 34.1523292268859
Condition 3: 24 Hour
Replicate 15.1017349394898
Replicate 25.6940047462602
Replicate 36.3660317553394


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79036.p1 GENE.R_Transcript_79036~~R_Transcript_79036.p1 ORF type:complete len:306 (+),score=52.37,PIG-X|PF08320.8|3.4e-22 R_Transcript_79036:175-1092(+)
ATGGGAGTTGGGTTGGTTCTATTTATACTCCTTGCTCGCTTTACCATCTGCTTTTCCAGCTCTGTTAGCTCTTCCCCTTTTCATCAGAACAGTAAAAACAATGATGACATATACTCTAGCAAATATGGCACAAGCTTGGCGCCTTGTTTCGAGAGATATGTTGCAAAATCTTATTTTAAAGAGTGTGAAAGATTTGTGGATTCAGAGTTCCAAGAGTTTGTGGCCCATAAGCTTTCAGTGGGTACAGGCAAAGCCTTTCCCAGGTTACTGAACTTGGAGCGCCATCTAATTGGTGAAGGTGCTCATCGACGTCTATCTTCATCCATCCGGTTCAGCATTCAACCAGATTTGATGCCTGCCTCTTCCTCACAGGTGTGTGAGGTCATAATTATTGAAAGACTACCATCTGGTGTTTTTGCAGACCCTTTCGAGTTGGAACATCTTCTTCAGCGCAAAGTATTCAAGGATGCTTCTGTTTTTGGTGATGTGAATTTGGAATTGCCTTCATTCCATTCCAATCGGTCTATTGTTGAAGTTCACGTAGATTCTACAGTGATCAAGCCTTTAGGGCATGAGATTGTACAAGAGTTCAAGATAGAGATGCCATTGCATACACGATACCCTCCCCTGGAAGACAGTGGATATTCGGAAGTGAGATTTGGCATTCCTGATTTGTTAATGCTCTGCAAGATTCATGAAGAGCTGCCTGCTTCAAGCTGTTTGTTAATATCTATTGCTAGTAGTGGCAGTCTGCAATTCAATGATGTTGTATGGAGCATACCGGCTGGTGTCAAGGCCCATGCAGGAATTGTATCGGTTGTTTCTCTTACAGCAGCCTTATTATCGGCAATTTTGATTATCATTGCTACATTCCACCAGTCATCAATGCAGTCTGTCGAAAGGTTGAAACAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79036.p1 GENE.R_Transcript_79036~~R_Transcript_79036.p1 ORF type:complete len:306 (+),score=52.37,PIG-X|PF08320.8|3.4e-22 R_Transcript_79036:175-1092(+)
MGVGLVLFILLARFTICFSSSVSSSPFHQNSKNNDDIYSSKYGTSLAPCFERYVAKSYFKECERFVDSEFQEFVAHKLSVGTGKAFPRLLNLERHLIGEGAHRRLSSSIRFSIQPDLMPASSSQVCEVIIIERLPSGVFADPFELEHLLQRKVFKDASVFGDVNLELPSFHSNRSIVEVHVDSTVIKPLGHEIVQEFKIEMPLHTRYPPLEDSGYSEVRFGIPDLLMLCKIHEELPASSCLLISIASSGSLQFNDVVWSIPAGVKAHAGIVSVVSLTAALLSAILIIIATFHQSSMQSVERLKQP*

Click here to download the sequence:
Link to NCBI Protein BLAST