Transcript Information: R_Transcript_79037.p1


Annotated TAIR IDAT5G46850.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19010714-19012010 | Forward length=325
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3801779545776
Replicate 22.3329222684776
Replicate 32.6663927360601
Condition 2: 8 Hour
Replicate 12.2024322968422
Replicate 21.5380500737323
Replicate 32.4010066958184
Condition 3: 24 Hour
Replicate 12.1864578312099
Replicate 22.5672788126598
Replicate 32.779391071352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79037.p1 GENE.R_Transcript_79037~~R_Transcript_79037.p1 ORF type:complete len:189 (+),score=30.36,PIG-X|PF08320.8|1.5e-19 R_Transcript_79037:389-955(+)
ATGCCTGCCTCTTCCTCACAGGTGTGTGAGGTCATAATTATTGAAAGACTACCATCTGGAGTTTTTGCAGACCCTTTTGAGTTAAAACATCTTCTTCAACGCAAAGTATTCAATGATGCTTATGTTTTTGGTGATGTAAATTTGGAATTGCCTTCATTCCGTTCCAATCGGTCTATTGTTGAAGTTCACGTAGATTCTACAGTGATCAAGCCTTTAGGGCATGAGATTGTACAAGAGTTCAAGATAGAGATGCCATTGCATACACGATACCCTCCCCTGGAAGACAGTGGATATTCGAAAGTGAGATTTGGCATTCCTGACTTGTTAATGCGCTGCAAGATTCATGAAGAGCCGCCTGCTTCAAGCTGTTTGTTAATATCTATTGCTAGTAGTGGCAGTCTGCAACTTGATGATGTTGTATGGAGCATACCAGCTTGTGTCAAGGCCCATGCAGGAATTGTATCGGTTGTTTCTCTTACAGCAGCCTTATTATCGGCAATTTTGATTATCATTGCTACATTCCACCAGTCATCAATGCAGTCTGTCGAAAGGTTGAAACAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79037.p1 GENE.R_Transcript_79037~~R_Transcript_79037.p1 ORF type:complete len:189 (+),score=30.36,PIG-X|PF08320.8|1.5e-19 R_Transcript_79037:389-955(+)
MPASSSQVCEVIIIERLPSGVFADPFELKHLLQRKVFNDAYVFGDVNLELPSFRSNRSIVEVHVDSTVIKPLGHEIVQEFKIEMPLHTRYPPLEDSGYSKVRFGIPDLLMRCKIHEEPPASSCLLISIASSGSLQLDDVVWSIPACVKAHAGIVSVVSLTAALLSAILIIIATFHQSSMQSVERLKQP*

Click here to download the sequence:
Link to NCBI Protein BLAST