Transcript Information: R_Transcript_79083.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value6.2E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5792301616148
Replicate 25.6465246550358
Replicate 37.3564718650829
Condition 2: 8 Hour
Replicate 13.8998374981252
Replicate 24.0868452451253
Replicate 38.6729627768429
Condition 3: 24 Hour
Replicate 19.1711344799967
Replicate 24.9523557822184
Replicate 311.372462748545


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79083.p1 GENE.R_Transcript_79083~~R_Transcript_79083.p1 ORF type:complete len:383 (+),score=49.33,Pectinesterase|PF01095.15|3.8e-71 R_Transcript_79083:178-1326(+)
ATGTTAGGAAACTCAAGTATGATATTAGTAAAACCACTTGTACTACTACTAACTTCGTTAATGTTGAAAAGTGTGTGTTCTTCTTCATCGGTCCATCATGCTCAACAAAATGCAACCACAGTTTTTGAGAGGGATTTCCTGAAATGGGTTAACCATATTGGGTCAAAAACTCACAAGCACACTTGGGAATACCAGAAACAGAAAGCAGAGAACAAAATGAAGCCTTGCAAAACCCTCAGAGTGAGCAAAAAGAAGAATTGTTCATCATCTTCAGAGCATTTTGAAAGTGTGCAAAAGGCTATTGATTCACTTCCAACTGATAACTCGTGCCGAGTGGTCATTTCCATTGGTCCTGGGGAGTACAGGGAAAAAGTGGAGCTCCCTCGAACAATGGGTTATATTACACTAAAAGGAGCAGGGGCAGATAAGACCATAATTGAGTGGGATGACACTGCAGACAGGTTAGGAAAGGGCGGGCACCCATTAGGGACTTACGCCTCTGCCACTGTCGCTGTTAATTCTCCCTTCTTCATTGCCAAGAATATCACATTTAAGAATGTGGCACCACCGCCGCCATCAGGAGCATTAGGGAAGCAAGCAGTAGCACTGAGAATTACAGCAGATAGAGCAGCATTTGTAGGCTGCAAATTCATTGGGGCACAGGATACCCTATACGATCACACCGGGAGACATTACTTTAAGGACTGTTACATCCAGGGCTCAGTCGATTTCATATTTGGTAATGGTCTATCTCTCTATGACGGCTGCCATTTGCATGCTGTGACCAACACCTATGGTGCTTTAACAGCCCAAAAGAGGGAGAGCTTACTGGAGGAAACAGGGTTTTCATTTGTGAATTGCAAGATTACAGGGCAAGGTGTTCTCTACCTTGGGCGAGCTTGGGGAACCTTCTCTAGGGTCATCTTCGCTTACACTTACATGGACAAGATCATCATGCCTAGCGGCTGGTATGACTGGGGTGACAAGAGCAGGGATATGACCGTATTTTTTGGGCAATACAAGTGCTCAGGGCCGGGTGCTGATTATGGAAACAGGGTATCTTGGTCGAGGGAGCTGACTACAGAAGAAGCTAAACCATTCATTTCCCTTGACTTCATTGACGGCCATAATTGGCTCAAAAACTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79083.p1 GENE.R_Transcript_79083~~R_Transcript_79083.p1 ORF type:complete len:383 (+),score=49.33,Pectinesterase|PF01095.15|3.8e-71 R_Transcript_79083:178-1326(+)
MLGNSSMILVKPLVLLLTSLMLKSVCSSSSVHHAQQNATTVFERDFLKWVNHIGSKTHKHTWEYQKQKAENKMKPCKTLRVSKKKNCSSSSEHFESVQKAIDSLPTDNSCRVVISIGPGEYREKVELPRTMGYITLKGAGADKTIIEWDDTADRLGKGGHPLGTYASATVAVNSPFFIAKNITFKNVAPPPPSGALGKQAVALRITADRAAFVGCKFIGAQDTLYDHTGRHYFKDCYIQGSVDFIFGNGLSLYDGCHLHAVTNTYGALTAQKRESLLEETGFSFVNCKITGQGVLYLGRAWGTFSRVIFAYTYMDKIIMPSGWYDWGDKSRDMTVFFGQYKCSGPGADYGNRVSWSRELTTEEAKPFISLDFIDGHNWLKNL*

Click here to download the sequence:
Link to NCBI Protein BLAST