Transcript Information: R_Transcript_79154.p1


Annotated TAIR IDAT2G25600.1
Annotated Gene NameShaker pollen inward K+ channel
Annotated Gene Symbol(s)SPIK, AKT6
Annotation TypeOrtholog
Chromosome Positionchr2:10894603-10898369 | Forward length=888
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1100.88263070621
Replicate 276.361115488827
Replicate 389.554061186333
Condition 2: 8 Hour
Replicate 146.223030278419
Replicate 259.193582972486
Replicate 363.603409951619
Condition 3: 24 Hour
Replicate 169.899028191567
Replicate 258.561386149322
Replicate 376.268496744034


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79154.p1 GENE.R_Transcript_79154~~R_Transcript_79154.p1 ORF type:complete len:873 (+),score=149.20,Ion_trans|PF00520.27|5.3e-36,Ank_2|PF12796.3|1.2e-11,Ank_2|PF12796.3|4.1e-08,KHA|PF11834.4|1.3e-20,Ank_4|PF13637.2|2.4e-07,Ank_4|PF13637.2|0.00084,Ank_4|PF13637.2|0.012,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|1.1e-08,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|2.2e+03,Ank|PF00023.26|1.3e+02,Ank|PF00023.26|1.7e-05,Ank|PF00023.26|24,Ank|PF00023.26|0.0011,cNMP_binding|PF00027.25|9.6e-15,Ank_3|PF13606.2|4e+02,Ank_3|PF13606.2|2.2e-05,Ank_3|PF13606.2|2.9e+03,Ank_3|PF13606.2|1.2e+04,Ank_3|PF13606.2|0.0062,Ank_3|PF13606.2|1.6e+04,Ion_trans_2|PF07885.12|9.7e-12 R_Transcript_79154:126-2744(+)
ATGAAAGGTTGGTTGAATCCCTCGTTATGTTCTGGGTTTTCAAAGGAGCATGTTGATGGGATTGAACGAGCTTCAATTGATGGAACCAGCCAATTTAGTTTCTCTAAAGGCCTCCTTCCCTCCCTTGGTGCTCGCAGTAATCGTCGTGTTATTCTTCGTCGTTACATTATCTCCCCTTTTGATCCTCGTTATAGAGCATGGGAGACATTTCTGGTTCTTTTGGTCTTTTATACAGCTTGGGTGTCGCCATTTGAGTTTGGATTCCTCCAGAGACCAATTGCCACTCTTTCTACGGTTGATAACGTTGTTAATGGACTTTTTGGCATTGACATCATTATGACTTTCTTTGTCGCGTATCTTGATCCACAAACTTATCTCCTTGTTGATGACCAAATGATAATTGCTTGGAGGTATATACGCACCTGGTTCATCTGTGATGTCATATCAACAATCCCTTCAGAACTTGTGGGGAAGATTATCCCTGATTCAATCCCAGCATATGGTCTCTTCAATATGCTACGCCTTTGGCGTCTCCGCAGAGTCAGTAAGATGTTTTCTAGATTGGAGAAAGATAAGGATATCAGCTACTTCCTGGTTCGATGCTCGAAGCTAGTTATTGTGACTCTTTTTGCTGTTCATTTGGCTGCTTGCTTTTATTATTATATTGCAGCCAATTATCCTGACCCAAAGAGAACTTGGATGGCTCTTGCATTGGATGACTTTCACAATGCGGCACTGTCAATTCGATATGTAACATCAATCTATTGGTCCATTACCACCCTCACAACAACTGGCTATGGTGATTTACACCCCGTGAATATAAGGGAGATGATATTTGACATCTTTTATATGCTCTTCAATCTGGGTTTGACTGCATATTTGATTGGGAATATGACAAACCTGGTGGTTCATGGGACTAGCCGGACTAGAAAATTTAGGGACACGATTCAAGCTGCTTCAAGTTTTGCACTAAGGAACAGGCTTCCTATCCGCCTCCAAGAACAGATGCTTGATCATTTGTGCCTGAAATATAGAACTGATTCTGAAGGATTGCAACAGCAAGAGATTCTCGAATCCCTTCCGAAGGCAATTAAGTCAAGTATATCACATTATCTCTTCTATTCGATGCTTGATAAGGTGTATCTGTTTAAAGAGGTGTCCAACGACTTGCTTTTTCAGCTGGTCTCAGAGATGAAAGCTGAGTACTTCCCTCCCAAAGAAGATGTGATTTTGCAGAATGAAGCACCCACAGATTTGTATGTGCTAGTCTCCGGTGCTGTGGAATTTCTTTCCGACAGAAATGGAAACCAACAGATTGTTAGAGAGGCTACTTCAGGAGAAGTTTGTGGTGAGATAGGTGTTCTTTGTTATAGACCACAGCTCTTCACTGTTCGGACCAAGAGATTGTGTCAGCTTCTGCGTCTGAATCGTACTGCCTTTTTGAATCTTGTCCGGGCAAATGTTGGAGATGGAGCAATCATCATGAGTAACCTCTTAGAGCATTTGAAACAGCATACTGATCCATTGATGCAATCTGTTCTCGAAGATGTTGAGAGCATGCTGGCTCGTGGGCGAATGGATCTGCCTCTCAGTTTATGTTTTGCAGTTGCAAGGGGAGATGAGCCATTGTTGCAACATTTGCTGACTCAAGGCTCTGATCCAAATGAGCCAGACATGAACGGGCGTACTGCTCTGCATATTGCAGCTGCAAATGGAAATGATAATTGTGCACTTGTCCTCCTTGAATATGGGGCAGATCCAAATGTCAAAGACTCAGAAGGAAATGTTCCACTTTGGGAGGCACTGATGGGGAGACACGAGTCCCTGATCAAGTTACTCATAGGGCAGGGTGCAACTCTAGCTTCAGGTGACGTGCCTCAATATGCGTGCTGTGCAGTAGAACAAGAAAACCTAGAGCTTCTCAAGGATATTGTCCGGTATGGTGGAGATGTAACATTGCCCAAGAATAATGGAACTACACCACTTCACGCAGCAGTTTCTGTGGGAGATGTTGCAATCATTACATTCCTCTTGAAGCAAGGGGCAGATGCTGAAAAGTCTGATGTGCATGGATGGACACCGAGGGGTCTGGCAGAATTTCATGGGAATGAAGAAGTAAAGGCATTATTCCGTTCTAAAGAAGAAAATAATCCACAATCAGTTGTAACGGTCCCTGATAGTGAGGGCGCTCCGACTTTCCTCAGGAAGTTGAGGACTGATTCAACGGACATCACTCCTCGTGTCCGTGAAGTGAGTTGGGCAGACAAAGGACGTAGACGTAGGGTCAATACATTTCGAAACTCGCTCTTTGGGATCGTGTCTGCGGCTACTAGAGGTGAGGCAGCTGAAGGAAGCAATTTCACAAACTCCCCAATATTTGGAAACCAATCAAAGAGAGTTTTTCTTAAATGCCCGGCGAAGGGGGAGGCTGTGAAGCTTGTGATGTTGCCTGAAACCATTCAAGAGTTACTCGACATTGGTACCAACAAATTTGGGTGCGTTTGTACTAAGGTTGTAACTGCAGACGGAGCTGAAGTTGATGAGATAGAAGTTATTAGAGACGGGGATCATCTTTCTCTCATCTGTGAAGATGAAAATAGTAACACACCTGCAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79154.p1 GENE.R_Transcript_79154~~R_Transcript_79154.p1 ORF type:complete len:873 (+),score=149.20,Ion_trans|PF00520.27|5.3e-36,Ank_2|PF12796.3|1.2e-11,Ank_2|PF12796.3|4.1e-08,KHA|PF11834.4|1.3e-20,Ank_4|PF13637.2|2.4e-07,Ank_4|PF13637.2|0.00084,Ank_4|PF13637.2|0.012,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|1.1e-08,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|2.2e+03,Ank|PF00023.26|1.3e+02,Ank|PF00023.26|1.7e-05,Ank|PF00023.26|24,Ank|PF00023.26|0.0011,cNMP_binding|PF00027.25|9.6e-15,Ank_3|PF13606.2|4e+02,Ank_3|PF13606.2|2.2e-05,Ank_3|PF13606.2|2.9e+03,Ank_3|PF13606.2|1.2e+04,Ank_3|PF13606.2|0.0062,Ank_3|PF13606.2|1.6e+04,Ion_trans_2|PF07885.12|9.7e-12 R_Transcript_79154:126-2744(+)
MKGWLNPSLCSGFSKEHVDGIERASIDGTSQFSFSKGLLPSLGARSNRRVILRRYIISPFDPRYRAWETFLVLLVFYTAWVSPFEFGFLQRPIATLSTVDNVVNGLFGIDIIMTFFVAYLDPQTYLLVDDQMIIAWRYIRTWFICDVISTIPSELVGKIIPDSIPAYGLFNMLRLWRLRRVSKMFSRLEKDKDISYFLVRCSKLVIVTLFAVHLAACFYYYIAANYPDPKRTWMALALDDFHNAALSIRYVTSIYWSITTLTTTGYGDLHPVNIREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFALRNRLPIRLQEQMLDHLCLKYRTDSEGLQQQEILESLPKAIKSSISHYLFYSMLDKVYLFKEVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDLYVLVSGAVEFLSDRNGNQQIVREATSGEVCGEIGVLCYRPQLFTVRTKRLCQLLRLNRTAFLNLVRANVGDGAIIMSNLLEHLKQHTDPLMQSVLEDVESMLARGRMDLPLSLCFAVARGDEPLLQHLLTQGSDPNEPDMNGRTALHIAAANGNDNCALVLLEYGADPNVKDSEGNVPLWEALMGRHESLIKLLIGQGATLASGDVPQYACCAVEQENLELLKDIVRYGGDVTLPKNNGTTPLHAAVSVGDVAIITFLLKQGADAEKSDVHGWTPRGLAEFHGNEEVKALFRSKEENNPQSVVTVPDSEGAPTFLRKLRTDSTDITPRVREVSWADKGRRRRVNTFRNSLFGIVSAATRGEAAEGSNFTNSPIFGNQSKRVFLKCPAKGEAVKLVMLPETIQELLDIGTNKFGCVCTKVVTADGAEVDEIEVIRDGDHLSLICEDENSNTPAS*

Click here to download the sequence:
Link to NCBI Protein BLAST