Transcript Information: R_Transcript_79189.p1


Annotated TAIR IDAT5G46700.1
Annotated Gene NameTetraspanin family protein
Annotated Gene Symbol(s)TET1, TRN2
Annotation TypeOrtholog
Chromosome Positionchr5:18951035-18952439 | Forward length=269
E-Value2.2E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3924237591569
Replicate 20.33683904411173
Replicate 30.97996738379262
Condition 2: 8 Hour
Replicate 11.1784640883701
Replicate 21.6740767153829
Replicate 30.97067436472658
Condition 3: 24 Hour
Replicate 10.73661413564826
Replicate 23.302391705541
Replicate 34.3307223177284


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79189.p1 GENE.R_Transcript_79189~~R_Transcript_79189.p1 ORF type:complete len:187 (+),score=11.26,Tetraspannin|PF00335.16|3e-15,Tetraspannin|PF00335.16|2.1e+03 R_Transcript_79189:315-875(+)
ATGGCACTAAGCAGTAATGTGATAGGTGGCATTAACACCTTGGCCATGCTACTCTCAATCCCCATCATTGGGACGGGGATATGGCTAGCCAACCAGCCTGAGAACTCATGTGTCAAATTCTTACAATGGCCAGTGATAATCATAGGTGTATTAATATTAATAGTTGGTATTATTGGGATTGTGGGTGGGTTTTGGCGAATAGTTCCACTTCTCATAATCTACCTTATTGCTATGCTTATAATGATAATATTGCTAGCTGCATTGGTTTGGTTTGTTTTCTCAGTCACCACAAGAGGGTCGGGTCACCCGGCCCCTAACCGGGCTTACTTGGAGTACAGGCTTGATGATTTCTCGGGCTTTCTAAGGAGACGGGTCCAAGGCCCGTTTAAATGGGACCAGATTAGGAGTTGCTTAAGTTCTACTGGCACTTGTGCTGAGTTGAACCAGACTTATACTGGCGCTCAGGATTTCTTCAATGCTCCCCTTTCTCCTGTTGAGGTATCTTCTCTTCTCTTTTCTTTTATTGTTTTGTTTTTGGTATTTATGCTGCTTGTTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79189.p1 GENE.R_Transcript_79189~~R_Transcript_79189.p1 ORF type:complete len:187 (+),score=11.26,Tetraspannin|PF00335.16|3e-15,Tetraspannin|PF00335.16|2.1e+03 R_Transcript_79189:315-875(+)
MALSSNVIGGINTLAMLLSIPIIGTGIWLANQPENSCVKFLQWPVIIIGVLILIVGIIGIVGGFWRIVPLLIIYLIAMLIMIILLAALVWFVFSVTTRGSGHPAPNRAYLEYRLDDFSGFLRRRVQGPFKWDQIRSCLSSTGTCAELNQTYTGAQDFFNAPLSPVEVSSLLFSFIVLFLVFMLLVI*

Click here to download the sequence:
Link to NCBI Protein BLAST