Transcript Information: R_Transcript_7924.p1


Annotated TAIR IDAT5G11380.1
Annotated Gene Name1-deoxy-D-xylulose 5-phosphate synthase 3
Annotated Gene Symbol(s)DXPS3
Annotation TypeOrtholog
Chromosome Positionchr5:3630172-3633250 | Forward length=700
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.569468892828
Replicate 26.5231224594324
Replicate 38.3557170427019
Condition 2: 8 Hour
Replicate 15.0941466603145
Replicate 27.505316789968
Replicate 39.390500362558
Condition 3: 24 Hour
Replicate 110.157476429456
Replicate 27.7392239935035
Replicate 310.655456789322


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7924.p1 GENE.R_Transcript_7924~~R_Transcript_7924.p1 ORF type:complete len:721 (+),score=131.41,DXP_synthase_N|PF13292.2|8.3e-85,Transketolase_C|PF02780.16|4.8e-30,Transket_pyr|PF02779.20|6.1e-28 R_Transcript_7924:248-2410(+)
ATGGGTATTGCTTATCTTGAATACCCGATTGGAATGAATGCTCAATTCAATGGAAAGTGTAGAGCTTCTGTCCATAAACATGAATTCACAACCTTCAGTTGCCAACCCAATTGTGAATTCTCCAGAATTAAAGAGTGCCCATCAGTTGTGTCTAGCCCTTTGTCTAAGAGATATGCTGGAAGAATTCAAGCTCTTTCCGACAACAATGAATTTTTCTGGGAAGAAATATCTACGCCTGTACTTGATATGGTTGATAATCCCATTAACTTGAAAAATCTGTCGCCTAAGGAGTTAAAACAATTAGCTTATGAAATCCGTGGAGAGCTCGCTCTCATGTTATCAAAAGGAGAGCAAGCTCTGAAAGCTAGTTTATCTGTTGTGGAGCTGACTGTTGCAATTCACTATGTCTTTCATGCACCGATGGACAAAATATTGTGGGATATGGGGGATCAAACATATGCTCATAAATTACTCACAGGAAGGAGATCCCTTATTGCTACACTCAGGAAAAAGAATGGACTTTCTGGTTATACCTGCCGGACTGAGAGTGAATTTGATCCATTTGGTGCAGCTCATGGGTGCAACAGTATCTCTGCTGGACTGGGTTTGGCTGTTGCAAGGGATATTAAAGGGAAAAGAGAGCGTGTAGTTTCAGTTATCAGTAATGAAACAACTACTGCTGGTCAGGTCTACGAGGCTATGAGTAATGCTGGTTATTTGGACTCCAACTTGGTGGTGATCTTAAATGACAGTCGTCATTCTTTACATCCTAAGCCTGACGAGGACTTCAAGACACCCATCAATGCACTTTCTAGCAGTTGGAGCAAAGTTCAATCCAGTAAATCTTTCCGAAAACTCAGAGAAGTTGCTAAGGGTCTTACTAAGAGGATTGGCAAGGGTTTATATGAATGGGCTGCCAAAGTCGATGAGTACGCACGTGGTATGCTGGGTCCTACAGGATCTACTCTTTTTGAAGAGCTAGGACTGTATTACATTGGTCCTGTAGATGGACACAACATTGATGACCTTATCTGTGTACTGCAAGAGGTAGCATCCCTGGATTCTATGGGCCCTGTGCTGGTCCATGTCTTGACGGATGACAGTATTGGACAAAAAGGAAAGAAAAATAGCCAGACAGCAGAAAACCTTGGTGGAGACTCGTATCAGGCAGATTTGTTGCTAGCTAGGACTGGCCCACAAACATATAGTGATTACTTCATAGAGACTTTATCTATGGAGGCTGAGAAGGATAAGGATATCATTGCAGTTCATGCAGGAATGAAAATGGAGAAATCATTTGAGTTGTTCCAAGAGAATTTTCCAGATAGGTTTTTTGATGTGGGGATGGCTGAGCAACATGCAGTTACATTTTCGGCTGGTCTAGCCTGTGGAGGGCTCAAACCGTTTTGCATCATTCCATCTGCCTTTCTGCAGCGAGCTTATGATCAGATTGTTCATGATGTAGATCGACAGAAAATTCCAGTGCGTTTTGCCATTACAAATGCAGGATTGGTAGGGGCTGATGGACCAGTGTGTTCTGGACCGTTTGACATAACTTTTATGTCTTGCTTGCCGAACATGATTGTCATGGCACCCTCCGATGAGTTTGAACTTGCCCGCATGGTCGTCACGGCAGCTCAAATTGATGACCAACCAGTATGCTTCAGGTATCCTAGTGGTGCTGTTGTTGGCATAAATGAGTCCATGGACTGTGGAACACCTCTTGAGATAGGCAAGGGAAGAATTCTGTTCGAAGGAAAAGACGTTGCTTTGCTAGGATATGGTGCCATGGTCCAGAACTGTGTCTCGGCTCGGTCCCTTCTTTCGAAACTTGGAGTGGAAGTTACTGTTGCCGATGCAAGATTCTGCAAGCCCCTTGACATTGAGCTTGTAAGAAATCTTTGTGAAAATCATGCCTTTTTAATTACTGTTGAGGAAGGATCCATGGGAGGATTTGGGTCCCATGTCGCCCAATTCATCGCCCTCGACGGAAAGCTCGATGGAAGAGTCAAGTGGAGACCAATTGTTTTGCCAGATACCTACATCGAGCACGCTTCTCCAAAAGAACAGCTGACTCGTGCAGGGCTGACCAGCCATCATATTGCTGCTACTGCATTATCATTACTAGGTCGGACTCGAGAAGCCCTCTTGTTGATGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7924.p1 GENE.R_Transcript_7924~~R_Transcript_7924.p1 ORF type:complete len:721 (+),score=131.41,DXP_synthase_N|PF13292.2|8.3e-85,Transketolase_C|PF02780.16|4.8e-30,Transket_pyr|PF02779.20|6.1e-28 R_Transcript_7924:248-2410(+)
MGIAYLEYPIGMNAQFNGKCRASVHKHEFTTFSCQPNCEFSRIKECPSVVSSPLSKRYAGRIQALSDNNEFFWEEISTPVLDMVDNPINLKNLSPKELKQLAYEIRGELALMLSKGEQALKASLSVVELTVAIHYVFHAPMDKILWDMGDQTYAHKLLTGRRSLIATLRKKNGLSGYTCRTESEFDPFGAAHGCNSISAGLGLAVARDIKGKRERVVSVISNETTTAGQVYEAMSNAGYLDSNLVVILNDSRHSLHPKPDEDFKTPINALSSSWSKVQSSKSFRKLREVAKGLTKRIGKGLYEWAAKVDEYARGMLGPTGSTLFEELGLYYIGPVDGHNIDDLICVLQEVASLDSMGPVLVHVLTDDSIGQKGKKNSQTAENLGGDSYQADLLLARTGPQTYSDYFIETLSMEAEKDKDIIAVHAGMKMEKSFELFQENFPDRFFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQIVHDVDRQKIPVRFAITNAGLVGADGPVCSGPFDITFMSCLPNMIVMAPSDEFELARMVVTAAQIDDQPVCFRYPSGAVVGINESMDCGTPLEIGKGRILFEGKDVALLGYGAMVQNCVSARSLLSKLGVEVTVADARFCKPLDIELVRNLCENHAFLITVEEGSMGGFGSHVAQFIALDGKLDGRVKWRPIVLPDTYIEHASPKEQLTRAGLTSHHIAATALSLLGRTREALLLMC*

Click here to download the sequence:
Link to NCBI Protein BLAST