Transcript Information: R_Transcript_79271.p1


Annotated TAIR IDAT5G12900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4072151-4074445 | Reverse length=562
E-Value5E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6579820536785
Replicate 21.232576340228
Replicate 33.1995240771954
Condition 2: 8 Hour
Replicate 11.3878627905321
Replicate 22.6706316369027
Replicate 34.51953057957
Condition 3: 24 Hour
Replicate 12.6489777570428
Replicate 21.2500956456198
Replicate 33.1014966155523


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79271.p1 GENE.R_Transcript_79271~~R_Transcript_79271.p1 ORF type:internal len:494 (+),score=91.57 R_Transcript_79271:1-1479(+)
AACTTTAACCCCAAACTCTCTCTCTTTTTCCCCTGTCTCTCTGGATACCAATATCCTTCATTATATATCATCTCCTTTTTTCTCCAATCCCAACAAGAGGCAAAAACAGGGGACTCTGTTTGTAGTTGTACATGCTCTGTTTCTTTGTTAATGGCTACAGCAGTAGGTGTGAATGGAGAAGAAGGGAATATTAGCAGGCAAGAAATACAAGCAGCCATTGCTAAAGCTGTGGAACTCAGAGCTCTTCATGCGGCTTTAATGCAAGGCAATAGCCCTGCTCATCTTAGATTTCTTTCAGCTTCTTCTCCTACTTTATCTAGACCTACTTCTCACTTCTCTGCTCATGATTACCCTGTTTTTACTCCTAGTTATGAAGATGAGCCCTTGCCAGGGTATAGCCACATCCCCACAGTCAGCCAAGCGATATCGGAAGGCTGGGATGAGAACATATTAGGAGAGAATCAAATGGAAGTCGATGAAAATACAACTGTAAAGTTGTCAGAGTACACAAGAGCAAATGCATCACGGAAAGGGGTTCCACCAGGATTAGTGAATTCAGATCAGCATATTTGCCCTGCTGATGACACCAAATCGGTAGCTAGTTCGTGCACGAACCACCTTGCGTTTCTGCAAACTTCTCCAGGAACTGAAAAGCAAAAGTCGAGGAGGAGAAACAGTTTAGGGGACTTGAAATCAGTGTCTTCCTGTAACAAGTGTAAGCCTGCAATTATTAGCACTGATAATGATGATATCAGAAGTAGCAAGCACTACTCTAACATGGTCGTGCCACTAACAGATTCTCATGCCACCATCACTGCCTCACAGAACAAACCTCGAGGCATGATCCTCTCGTGGCTATTGCCTCGGTTCAAGAGAAGGCAAAAGAACGAGAACACCACTTCACCGATTAGAACAGAATCCGAGGAAGTGTCACAAGCTCTCAAGGACTTGGGGATTGTGTCGATTGAGACACTCAAACGAGAGCTGATTGAAGCGAATCAGAAGAGGGATTCGGCTCTAAAGGAAGTCTCTGATATGAAGTCTTTGTTTGGAGAGCTGAAAAAGAAGCTTGAGAATTTGGAGTCGTACTGTGAAGAGCTTAAGAAGGCTCTGAGACAAGCCGTGCAGACTAATGGTAGCTCTCGAGGGAATGACAAGCTTGGGAGTCTCTCTAAGAGGGGGAAACTCAATGATGGAACTAATGCAGATAGTTTGCCTGTTAGTGAAGATGTGATGATTGAAGGTTTTTTACAGATTGTTTCGGAAGCAAGATTGTCAGTCAAGCAGTTCTGCAAGACGCTTTCTGCTCAAATCGAAGAAACAGATGGACAACTCATGGAAAACTTAAACCAGCTCCTAAAACCCTACAAGCTCTCTGTAAATTCAAGGTACTCAAAGGCGGTTTTCTACCACTTGGAAGCGATCATAAATCAAGCATTCTACCAGGATTTCGAGAACTGTGTGTTTCAGAAAAACGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79271.p1 GENE.R_Transcript_79271~~R_Transcript_79271.p1 ORF type:internal len:494 (+),score=91.57 R_Transcript_79271:1-1479(+)
NFNPKLSLFFPCLSGYQYPSLYIISFFLQSQQEAKTGDSVCSCTCSVSLLMATAVGVNGEEGNISRQEIQAAIAKAVELRALHAALMQGNSPAHLRFLSASSPTLSRPTSHFSAHDYPVFTPSYEDEPLPGYSHIPTVSQAISEGWDENILGENQMEVDENTTVKLSEYTRANASRKGVPPGLVNSDQHICPADDTKSVASSCTNHLAFLQTSPGTEKQKSRRRNSLGDLKSVSSCNKCKPAIISTDNDDIRSSKHYSNMVVPLTDSHATITASQNKPRGMILSWLLPRFKRRQKNENTTSPIRTESEEVSQALKDLGIVSIETLKRELIEANQKRDSALKEVSDMKSLFGELKKKLENLESYCEELKKALRQAVQTNGSSRGNDKLGSLSKRGKLNDGTNADSLPVSEDVMIEGFLQIVSEARLSVKQFCKTLSAQIEETDGQLMENLNQLLKPYKLSVNSRYSKAVFYHLEAIINQAFYQDFENCVFQKNG

Click here to download the sequence:
Link to NCBI Protein BLAST