Transcript Information: R_Transcript_79273.p1


Annotated TAIR IDAT5G12900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4072151-4074445 | Reverse length=562
E-Value1.3E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.044590277205
Replicate 214.573902641901
Replicate 317.670911859889
Condition 2: 8 Hour
Replicate 116.214169393638
Replicate 220.895210594452
Replicate 323.36829199196
Condition 3: 24 Hour
Replicate 116.398433734074
Replicate 213.270222996347
Replicate 315.15585601849


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79273.p1 GENE.R_Transcript_79273~~R_Transcript_79273.p1 ORF type:complete len:595 (+),score=97.71 R_Transcript_79273:429-2213(+)
ATGGCTACAGCAGTAGGTGTGAATGGAGAAGAAGGGAATATTAGCAGGCAAGAAATACAAGCAGCCATTGCTAAAGCTGTGGAACTCAGAGCTCTTCATGCGGCTTTAATGCAAGGCAATAGCCCTGCTCATCTTAGATTTCTTTCAGCTTCTTCTCCTACTTTATCTAGACCTACTTCTCACTTCTCTGCTCATGATTACCCTGTTTTTACTCCTAGTTATGAAGATGAGCCCTTGCCAGGGTATAGCCACATCCCCACAGTCAGCCAAGCGATATCGGAAGGTTGGGATGAGAACAGATTAGGAGAGAATCAAATCGAACTCGATGAAAATACAACTGTAAAGTTGTCAGAGTACACAAGGGCAAATGCATCATCAAGGAAAGGGCTTCCACCTGGACTAGTGAATTCAGATCAGCATATTTGCCCTGCTGATGACACCAAATCGGTAGCTAGTTCGTGCACGAACCACCTTGCGTTTCTGCAAACTTCTCCAGGAACTGAAAAGCAAAAGTCGAGGAGGAGAAACAGTTTAGGGGACTTGAAATCAGTGTCTTCCTGTAACAAGTGTAAGCCTGCAATTATTAGCACTGATAATGATGATATCAGAAGTAGCAAGCACTACTCTAACATGGTCGTGCCACTAACAGATTCTCATGCCACCATCACTGCCTCACAGAACAAACCTCGAGGCATGATCCTCTCGTGGCTATTGCCTCGGTTCAAGAGAAGGCAAAAGAACGAGAACACCACTTCACCGATTAGAACAGAATCCGAGGAAGTGTCACAAGCTCTCAAGGACTTGGGGATTGTGTCGATTGAGACACTCAAACGAGAGCTGATTGAAGCGAATCAGAAGAGGGATTCGGCTCTAAAGGAAGTCTCTGATATGAAGTCTTTGTTTGGAGAGCTGAAAAAGAAGCTTGAGAATTTGGAGTCGTACTGTGAAGAGCTTAAGAAGGCTCTGAGACAAGCCGTGCAGACTAATGGTAGCTCTCGAGGGAATGACAAGCTTGGGAGTCTCTCTAAGAGGGGGAAACTCAATGATGGAACTAATGCAGATAGTTTGCCTGTTAGTGAAGATGTGATGATTGAAGGTTTTTTACAGATTGTTTCGGAAGCAAGATTGTCAGTCAAGCAGTTCTGCAAGACGCTTTCTGCTCAAATCGAAGAAACAGATGGACAACTCATGGAAAACTTAAACCAGCTCCTAAAACCCTACAAGCTCTCTGTAAATTCAAGGTACTCAAAGGCGGTTTTCTACCACTTGGAAGCGATCATAAATCAAGCATTCTACCAGGATTTCGAGAACTGTGTGTTTCAGAAAAACGGAACGCCAAAATTACTAGACCCCCATCAAGATCGACAACAACAGTTTCAATCTTTTGTGGCGCTTAGGAACCTGAGTTGGAACGAGGTACTGAAAAAAGGAACAAAGTATTACAGTGAAGAGTTCAGCAAGTTTTGTGATCAGAAAATGAGCTGCATAATCATGACCCTGAATTGGACTAGACAGTGGCCTGAAAACCTGCTTCAGTCGTTCTTCGTAGCAGCAAAGTGCATCTGGTTACTTCATTTGCTCGCGTTCTCTTTCTATCCACCTGTGGCGATCCTAAGAGTGGAAGACAACCGAACCTTTGATCCTCATTACATGGAAGATATGTTCACCGACAAGCAAAAGGCGCAGGGACCAAGCCGGGTTAAGATTATGGTCATGCCGGGTTTTTATGTCCAAGATAAGATTTTAAGATGTAAGGTTCTGTGCAGATACAAATCTGTAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79273.p1 GENE.R_Transcript_79273~~R_Transcript_79273.p1 ORF type:complete len:595 (+),score=97.71 R_Transcript_79273:429-2213(+)
MATAVGVNGEEGNISRQEIQAAIAKAVELRALHAALMQGNSPAHLRFLSASSPTLSRPTSHFSAHDYPVFTPSYEDEPLPGYSHIPTVSQAISEGWDENRLGENQIELDENTTVKLSEYTRANASSRKGLPPGLVNSDQHICPADDTKSVASSCTNHLAFLQTSPGTEKQKSRRRNSLGDLKSVSSCNKCKPAIISTDNDDIRSSKHYSNMVVPLTDSHATITASQNKPRGMILSWLLPRFKRRQKNENTTSPIRTESEEVSQALKDLGIVSIETLKRELIEANQKRDSALKEVSDMKSLFGELKKKLENLESYCEELKKALRQAVQTNGSSRGNDKLGSLSKRGKLNDGTNADSLPVSEDVMIEGFLQIVSEARLSVKQFCKTLSAQIEETDGQLMENLNQLLKPYKLSVNSRYSKAVFYHLEAIINQAFYQDFENCVFQKNGTPKLLDPHQDRQQQFQSFVALRNLSWNEVLKKGTKYYSEEFSKFCDQKMSCIIMTLNWTRQWPENLLQSFFVAAKCIWLLHLLAFSFYPPVAILRVEDNRTFDPHYMEDMFTDKQKAQGPSRVKIMVMPGFYVQDKILRCKVLCRYKSVA*

Click here to download the sequence:
Link to NCBI Protein BLAST