Transcript Information: R_Transcript_79281.p1


Annotated TAIR IDAT1G48870.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18072325-18074457 | Reverse length=593
E-Value1.1E-130
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0083383352576
Replicate 25.7417067481462
Replicate 36.8201289930292
Condition 2: 8 Hour
Replicate 18.0034704196497
Replicate 27.6345405638999
Replicate 310.955583756318
Condition 3: 24 Hour
Replicate 19.2128417353894
Replicate 210.777812597014
Replicate 39.810508411441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79281.p1 GENE.R_Transcript_79281~~R_Transcript_79281.p1 ORF type:complete len:618 (+),score=104.86,WD40|PF00400.28|7.6e-06,WD40|PF00400.28|5.3e-07,WD40|PF00400.28|0.0058,WD40|PF00400.28|18,WD40|PF00400.28|1.1e+03,WD40|PF00400.28|1.7e+02,Ge1_WD40|PF16529.1|0.00072,Ge1_WD40|PF16529.1|29,Ge1_WD40|PF16529.1|42,Ge1_WD40|PF16529.1|1.8e+02,WD40_like|PF17005.1|31,WD40_like|PF17005.1|0.00019 R_Transcript_79281:993-2846(+)
ATGGAAATGCAAGAAATGATGAACTTTGTTGAGTCAGAAGAAGATGTGTTCTTTGATTCTGTGGATGAATTTTCAGATGAAGTGTGGAGTAATGAGCTAAGGAGTGTTAAGGAAAGGCGCGAGGCTTTCCTGTACGAAATGGGTTTTGTTGAGGCTAGATATTCGGGTGAGTCTAATGATGATGGTTCATTGGAAAGGATGGTGGAAAGAACAAGAGAGGTGTCGAGTTCATGTTCTTCTTCGTCTTCAGGTGATTACGATGAGGTGTTTTACGGAAGGGATTGTGATGGGAGTGCTAGTAATTTGGCGATTGATGAATGTGAGCATAGTGAGCCAATTAGGCCATGTATGGATGTATGTAGAGATGATGGGGAGCCTTCACCATCAGAAGAATGTACAGTTGTCAGATCTGTAAACAAGAAAATTGGGAATTGGTGGAAAGAAATGATGAGCAAGAAGAGGGGAATGGTTAGTAGGTGTAAATGTGAGGCAGTAAAGGGGGAGACGAAGAAATCCGAGACTAGTAGAAGCGAAGTTCGTTTGCACAAAAAGAGATTCAAAGAGCTCAGTGCCTTGTATAGAATGCAGGAGATCCGAGCTCACAAGGGTGTCATTTGGACTATGAAATTCAGTCCAGATGGTCAGTATCTTGCCAGTGGTGGCCAAGATGGTGTTGTTCGGGTTTGGCAAGTTAAGTCGTTGGATGCTTGTCCCGAGAGGTTTACAGATGAATTTGATTCCACTCCTAGGGGAGACGTCAAAACCGGGTTTGGAAGAGAAAAGAAGGCAAAAGTTCCTGTATTTCTTCCTGATAAAATGTTGCACATTCAAGAGCAGCCTATACATGAGTTTCATGGCCATGCTAGTGATGTCTTAGACCTCGCTTGGTCTGACTCTAATTGTCTGCTTTCATCGTCAACAGATAAAACTGTTCGATTTTGGCAAGTTGGATCTGATGAATGCCTCAATGTCTTCCATCACACAGATTATGTGACATGCGTCCAATTCAATCCCATCGACAACAATCAGTTCATAAGCGGTTCCTTAGATGGGAAAGTTCGTACTTGGGGTTTGTCGAAGGGACGAGTGATTGACTGGGCTGATGTTGGAGATGCAGTCACAGCTGTTTGTTACCAGCCTGATGGACAAGGCTTTGTGGTGGGATCTCTCGGAGGCACCTGCCGATTCTATGAAGTTAAAGGTGACTTGGTCGAACTTACTGCACATATTCTAATTCACAGTAACAGAAAGCTGTCCACAAACAGGATTACAGGAATAAAGTTTTCTCCAGAGGACTCTCGGACAGTGATGGTCATGTCCGAAGATTCTAAACTCCGGATATTTGACAAGATGGATGTCGTCTGTAAATACCGAGGTCTTCCAAAATCAGGAACTCAAATGTCAGCATCATATACATCAGATGGAAGACATATAATCTCCATCGGAGAGGATTCTCGTGTCTATATCTGGAATCACGAGCACCCAAGTATCTTATCATCAAAACACGAAAAATCTGTTCGTTCTTGCGAGCACTTCTATGCTGAAGGTGTGTCTGTTGCAGTGCCCTGGTGTGGTACCGAAACAAGGCCAAAGGTTTCGTGTAGTAGCTGGAGCACCAAGCATGAATTTGCATCCAAATCAGTCCCACATTTCCCCTTCAGTAAGCTGTTCTCATCTCGAAGCTCTGCAACATGGCCGGAGGAATTGCTTCCCGAGTTCAGTTCACCCCTAGACCAAGGTCAAGGGGCTCAACAGGCCATTCTTCCTTCGACATGGGGGCTCGCGATGGTCACAGCTAATATACATGGAATGATCAACACATTCCACAATTATGGTCTCCCTGTTAGAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79281.p1 GENE.R_Transcript_79281~~R_Transcript_79281.p1 ORF type:complete len:618 (+),score=104.86,WD40|PF00400.28|7.6e-06,WD40|PF00400.28|5.3e-07,WD40|PF00400.28|0.0058,WD40|PF00400.28|18,WD40|PF00400.28|1.1e+03,WD40|PF00400.28|1.7e+02,Ge1_WD40|PF16529.1|0.00072,Ge1_WD40|PF16529.1|29,Ge1_WD40|PF16529.1|42,Ge1_WD40|PF16529.1|1.8e+02,WD40_like|PF17005.1|31,WD40_like|PF17005.1|0.00019 R_Transcript_79281:993-2846(+)
MEMQEMMNFVESEEDVFFDSVDEFSDEVWSNELRSVKERREAFLYEMGFVEARYSGESNDDGSLERMVERTREVSSSCSSSSSGDYDEVFYGRDCDGSASNLAIDECEHSEPIRPCMDVCRDDGEPSPSEECTVVRSVNKKIGNWWKEMMSKKRGMVSRCKCEAVKGETKKSETSRSEVRLHKKRFKELSALYRMQEIRAHKGVIWTMKFSPDGQYLASGGQDGVVRVWQVKSLDACPERFTDEFDSTPRGDVKTGFGREKKAKVPVFLPDKMLHIQEQPIHEFHGHASDVLDLAWSDSNCLLSSSTDKTVRFWQVGSDECLNVFHHTDYVTCVQFNPIDNNQFISGSLDGKVRTWGLSKGRVIDWADVGDAVTAVCYQPDGQGFVVGSLGGTCRFYEVKGDLVELTAHILIHSNRKLSTNRITGIKFSPEDSRTVMVMSEDSKLRIFDKMDVVCKYRGLPKSGTQMSASYTSDGRHIISIGEDSRVYIWNHEHPSILSSKHEKSVRSCEHFYAEGVSVAVPWCGTETRPKVSCSSWSTKHEFASKSVPHFPFSKLFSSRSSATWPEELLPEFSSPLDQGQGAQQAILPSTWGLAMVTANIHGMINTFHNYGLPVRV*

Click here to download the sequence:
Link to NCBI Protein BLAST