Transcript Information: R_Transcript_79296.p1


Annotated TAIR IDAT1G34150.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12436086-12439237 | Forward length=446
E-Value2E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0788739563617
Replicate 23.8708263337309
Replicate 32.9433238252039
Condition 2: 8 Hour
Replicate 12.5306620196873
Replicate 23.872554955736
Replicate 33.0928722006805
Condition 3: 24 Hour
Replicate 12.6292460791505
Replicate 23.0803434204717
Replicate 33.6683303944521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79296.p1 GENE.R_Transcript_79296~~R_Transcript_79296.p1 ORF type:complete len:358 (+),score=69.57,PseudoU_synth_1|PF01416.16|5.2e-10,PseudoU_synth_1|PF01416.16|1.5e-16,PseudoU_synth_1|PF01416.16|3.6e+03 R_Transcript_79296:339-1412(+)
ATGGAACCTACTGTTGAGTCTGAACTTTTCAAAGCTTTTGAAAAGACTAGGATGTTATTTGGTGACAAGAGGGAATCACAGTACTCAAGATGTGGTAGAACAGACAAGGGAGTTTCTGCTACTGGACAAGTCATTGCTCTATACCTGCGGTCAAATCTTAAAGCTGAGACAAGTTCTGCTCAAGTCATTTCTGAACAGTTTGAAGGAGAGATTGATTATGTGAGAATACTGAATAGAGTTCTACCAAAGGATATTCGGATTATTAGTTGGTGTCCAGTTCCTATGGACTTCCATGCAAGGTTCAGCTGTTTGAGCAGGGAGTACAAATACTTCTTTTGGAGGGGAAGTCTAGATCTACAAGCCATGCAGAATGCCGGCAAGAAATTTCTAGGTGAACATGACTTCAGGAACTTCTGTAAAATGGATGCAGTCAATTTGCACAACTACAAGCGGTGTGTCACATCATTTGATATAATTCCGAGCTATGAGCGATATAGAGGCAAAGAACTATGTGTCATCAAAATTAGAGGTAGTGCATTCCTGTGGCACCAGGTCCGATGTATGGTTGCTGTACTGTTTATGATTGGCCAAGGTCTGGAATCTGAAGATATTATAGATGTATTACTGGATATTGAGAGAACGCCTAGAAAGCCTCAATACATGATGGCCTCGGAAATGCCACTGGTTCTTCACTCTTGTGAATTCAGAGGTCTGCAGTTCTCTAGTTCAACAGGTGCTAGGCAGGCATTGAGTGTGCATCTTGAGAATGAATGTCAAAATCTCATACTCCAAGCTGCCATCTATCGTGAGGCTTTGGACAGTTGTTCATCTACGGAATATGGTGTTGGAAAGGGTTCACCTAAGAAAGAAACAGTCAAGAAGTCTCTCCATGTTCCTTTGATGAGACGACCAACTGAGCCATCATATGAGGAGCGGCGTGCCAAATTGAACTCGAGAGGGCTCGAGCAAGGTTTTGCTGAATTATCCCTTGAACAAAGGCAACCGAAAATAAAGGATAAGGTACTAGGAGCTACTTTAGCCCTTGCTCAGAAAGATATTAAGAGAAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79296.p1 GENE.R_Transcript_79296~~R_Transcript_79296.p1 ORF type:complete len:358 (+),score=69.57,PseudoU_synth_1|PF01416.16|5.2e-10,PseudoU_synth_1|PF01416.16|1.5e-16,PseudoU_synth_1|PF01416.16|3.6e+03 R_Transcript_79296:339-1412(+)
MEPTVESELFKAFEKTRMLFGDKRESQYSRCGRTDKGVSATGQVIALYLRSNLKAETSSAQVISEQFEGEIDYVRILNRVLPKDIRIISWCPVPMDFHARFSCLSREYKYFFWRGSLDLQAMQNAGKKFLGEHDFRNFCKMDAVNLHNYKRCVTSFDIIPSYERYRGKELCVIKIRGSAFLWHQVRCMVAVLFMIGQGLESEDIIDVLLDIERTPRKPQYMMASEMPLVLHSCEFRGLQFSSSTGARQALSVHLENECQNLILQAAIYREALDSCSSTEYGVGKGSPKKETVKKSLHVPLMRRPTEPSYEERRAKLNSRGLEQGFAELSLEQRQPKIKDKVLGATLALAQKDIKRNL*

Click here to download the sequence:
Link to NCBI Protein BLAST