Transcript Information: R_Transcript_79299.p1


Annotated TAIR IDAT1G34150.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12436086-12439237 | Forward length=446
E-Value1.1E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0743216416783
Replicate 22.2496036160319
Replicate 34.0393577457501
Condition 2: 8 Hour
Replicate 13.3886688096634
Replicate 21.9965073072487
Replicate 32.7551551834516
Condition 3: 24 Hour
Replicate 13.8433829064237
Replicate 21.9199890552065
Replicate 33.6642362757083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79299.p1 GENE.R_Transcript_79299~~R_Transcript_79299.p1 ORF type:complete len:448 (+),score=91.35,PseudoU_synth_1|PF01416.16|6.3e-13,PseudoU_synth_1|PF01416.16|2.3e-16,PseudoU_synth_1|PF01416.16|5.3e+03 R_Transcript_79299:88-1431(+)
ATGGAGGAAAACAATCCCATATCCTCCCTTCACCCCCAAATCAGTTCCCTTACTACCCGTATTAAGGAATTAGAGCTTGAGAATGCAAAATTGAAGACCCAACTTGCCAATTGCACTTGTAGTAAGGTGGAGATACAAAGGGATTCTAATGATGTTGAGGAAACAATAGAAACTGAGGTTTTGCCAGGCAAAATTGGTAAGAGCAGGAAAACAAGGTCAAGAGACTTGGATGCCAAGATATTGCATCATTGTCCCAAGAGATATGTTGCCCTGAAGGTCATATATTTTGGTCAGAGGTTTTATGGTTTTGCTTCAGAGGCACAAATGGAACCTACTGTTGAGTCTGAACTTTTCAAAGCTTTTGAAAAGACTAGGATGTTATTTGGTGACAAGAGGGAATCACAGTACTCAAGATGTGGTAGAACAGACAAGGGAGTTTCTGCTACTGGACAAGTCATTGCTCTATACCTGCGGTCAAATCTTAAAGCTGAGACAAGTTCTGCTCAAGTCATTTCTGAACAGTTTGAAGGAGAGATTGATTATGTGAGAATACTGAATAGAGTTCTACCAAAGGATATTCGGATTATTAGTTGGTGTCCAGTTCCTATGGACTTCCATGCAAGGTTCAGCTGTTTGAGCAGGGAGTACAAATACTTCTTTTGGAGGGGAAGTCTAGATCTACAAGCCATGCAGAATGCCGGCAAGAAATTTCTAGGTGAACATGACTTCAGGAACTTCTGTAAAATGGATGCAGTCAATTTGCACAACTACAAGCGGTGTGTCACATCATTTGATATAATTCCGAGCTATGAGCGATATAGAGGCAAAGAACTATGTGTCATCAAAATTAGAGGTAGTGCATTCCTGTGGCACCAGGTCCGATGTATGGTTGCTGTACTGTTTATGATTGGCCAAGGTCTGGAATCTGAAGATATTATAGATGTATTACTGGATATTGAGAGAACGCCTAGAAAGCCTCAATACATGATGGCCTCGGAAATGCCACTGGTTCTTCACTCTTGTGAATTCAGAGGTCTGCAGTTCTCTAGTTCAACAGGTGCTAGGCAGGCATTGAGTGTGCATCTTGAGAATGAATGTCAAAATCTCATACTCCAAGCTGCCATCTATCGTGAGGCTTTGGACAGTTGTTCATCTACGGAATATGGTGTTGGAAAGGGTTCACCTAAGAAAGAAACAGTCAAGAAGTCTCTCCATGTTCCTTTGATGAGACGACCAACTGAGCCATCATATGAGGAGCGGCGTGCCAAATTGAACTCGAGAGGGCTCGACCAAGGTTTTGCTGAATTATCCCTAGGAACAAAGGCAACCAAAAATAAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79299.p1 GENE.R_Transcript_79299~~R_Transcript_79299.p1 ORF type:complete len:448 (+),score=91.35,PseudoU_synth_1|PF01416.16|6.3e-13,PseudoU_synth_1|PF01416.16|2.3e-16,PseudoU_synth_1|PF01416.16|5.3e+03 R_Transcript_79299:88-1431(+)
MEENNPISSLHPQISSLTTRIKELELENAKLKTQLANCTCSKVEIQRDSNDVEETIETEVLPGKIGKSRKTRSRDLDAKILHHCPKRYVALKVIYFGQRFYGFASEAQMEPTVESELFKAFEKTRMLFGDKRESQYSRCGRTDKGVSATGQVIALYLRSNLKAETSSAQVISEQFEGEIDYVRILNRVLPKDIRIISWCPVPMDFHARFSCLSREYKYFFWRGSLDLQAMQNAGKKFLGEHDFRNFCKMDAVNLHNYKRCVTSFDIIPSYERYRGKELCVIKIRGSAFLWHQVRCMVAVLFMIGQGLESEDIIDVLLDIERTPRKPQYMMASEMPLVLHSCEFRGLQFSSSTGARQALSVHLENECQNLILQAAIYREALDSCSSTEYGVGKGSPKKETVKKSLHVPLMRRPTEPSYEERRAKLNSRGLDQGFAELSLGTKATKNKG*

Click here to download the sequence:
Link to NCBI Protein BLAST