Transcript Information: R_Transcript_79322.p1


Annotated TAIR IDAT4G28370.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14035016-14039122 | Forward length=562
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.132675810929
Replicate 212.820749811722
Replicate 318.690276162524
Condition 2: 8 Hour
Replicate 114.474829898018
Replicate 218.284473293146
Replicate 323.677410667655
Condition 3: 24 Hour
Replicate 118.325612495035
Replicate 217.17577683514
Replicate 320.53182917532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79322.p1 GENE.R_Transcript_79322~~R_Transcript_79322.p1 ORF type:complete len:565 (+),score=69.97,zf-RING_2|PF13639.2|5.5e+02,zf-RING_2|PF13639.2|1.2e-09,zf-rbx1|PF12678.3|3.2e-07,zf-RING_5|PF14634.2|4.3e-06,zf-C3HC4_2|PF13923.2|5.3e-06,zf-C3HC4_3|PF13920.2|1.4e-05 R_Transcript_79322:578-2272(+)
ATGATGGATATGTGTAGAAATGAGAAGAAGAGATTCGGGTTTGCGTTTTGTTGGGTTTTGTTAGTGGGTTTTATTGGGCTCTTTTTCCAACCGGTCAAGTGCTTGAGACCCTTGAGAGAAAGGTCCAGGTCTTGGGGTGACGAGTGGCTTTTTGTCAAGCAAGAAGATAGTAATCCGGGTCCTTTTTCTTCTTGGAACATAAGTGGAACCTACAAAGGTACTTGGAGGTTCTTGGAGTCCACAAATACCTCATCTAGATTCCCAGATTTTAAGAAGTCTGATGGGAACTCCATTATTGAGTTAATGAGTACTCCCACAAAAATAACTGGTGTACATTATGTTCAGGGTGTAATTATTTTCCATGATGTATTTGATGATGATCATGAAGCTGGTGGTGCTCAAATTCGAGTGGAAGGTGTATATATCTGGCCATTTAGGCAACTAAGAATGGTGGCGAACAGTGGAAAGGATGGTGAGTTGGGCCCAGAAGACGATTACCTCTTGTCTAATCCGTATCATTTGCTTGGTGTTTTCTCATCCCAAGTGTTCCAAGAATCCCCTCGTGATAAAATTTGGAGAAGAAAGAAATCATCAGTTCATGATATAGAGAAACATTGTAACATTGAAATAGCTGCTCAAGTTTCACGTATTATGTCCTCACAGAATGATGGAGATCATGATCGATATCATATAGAAGGCTTAATGGAGTCTCCATCTGTGGATGAAGATGGAGACTGCTTTTCTCCATTGATGCTGAATGCCACCTCTGTCAACATTGAAGTCTATTATAATAAAGCTGTCAACTATACGCTGATGGTTACCTTTGTGTCTTTTCTCCAAGTTCTTCTCTTGATCCGACAAATGGAACACAGCAATACCCAATCTGGTGCTGCTAAAGTTTCTATACTGATGATTGGGCAGCAGGCCATCATGGATGCTTATCTTTGCCTTCTACATTTAACAGCTGGAATTTTAGTGGAATCCTTGTTCAATGCTTTTGCAACTGCTGCCTTTTTTAAGTTTGTTGTCTTCTCAATATTTGAGATGCGATATCTCCTAGCTATATGGAAGGCAAGTAGGCCTGCAAATAGTGGTGAAGGTTGGGAGGCCATGAGACGTGAACTTTCACTTCTATACAGCCGTTTCTATGGGATTCTCTTGGGAGGCATTCTCATAATGTATGAGTTTCATAATTTTCTCCGGCCTATTCTACTTCTCATGTACTCATTTTGGATACCCCAAATTATTACCAACATTATTCGTGATTCAAGAAAACCACTACACCCACAATATATTTTAGGCATGACTATTACTCGACTAGCAATTCCGTTATACGTCTTCGGCTGCCCTAACAACTTCATGCGCATTCAACCTGATAAGAGGTGGTGTATATGCTTGAGTGTATTTATGGGACTCCAATCTATGGTCCTCCTCCTCCAACACTACCTTGGATCTCGATGTTTCATACCTCGTCAGATCCTACCTGAGAAGTATAGTTACTATCGTCGGTTCAATCCGGATGCAAACCGTACAACAGATTGTGTCATTTGTATGACTGCTATTGAGCTCTCTCAACGTTCTAGTGACTGCATGGTGACACCTTGTGACCATTTCTTCCATTCTGGGTGTTTACAAAGATGGATGGACATAAAGATGGAATGTCCAACATGTCGACGACCTCTGCCTCCTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79322.p1 GENE.R_Transcript_79322~~R_Transcript_79322.p1 ORF type:complete len:565 (+),score=69.97,zf-RING_2|PF13639.2|5.5e+02,zf-RING_2|PF13639.2|1.2e-09,zf-rbx1|PF12678.3|3.2e-07,zf-RING_5|PF14634.2|4.3e-06,zf-C3HC4_2|PF13923.2|5.3e-06,zf-C3HC4_3|PF13920.2|1.4e-05 R_Transcript_79322:578-2272(+)
MMDMCRNEKKRFGFAFCWVLLVGFIGLFFQPVKCLRPLRERSRSWGDEWLFVKQEDSNPGPFSSWNISGTYKGTWRFLESTNTSSRFPDFKKSDGNSIIELMSTPTKITGVHYVQGVIIFHDVFDDDHEAGGAQIRVEGVYIWPFRQLRMVANSGKDGELGPEDDYLLSNPYHLLGVFSSQVFQESPRDKIWRRKKSSVHDIEKHCNIEIAAQVSRIMSSQNDGDHDRYHIEGLMESPSVDEDGDCFSPLMLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWEAMRRELSLLYSRFYGILLGGILIMYEFHNFLRPILLLMYSFWIPQIITNIIRDSRKPLHPQYILGMTITRLAIPLYVFGCPNNFMRIQPDKRWCICLSVFMGLQSMVLLLQHYLGSRCFIPRQILPEKYSYYRRFNPDANRTTDCVICMTAIELSQRSSDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA*

Click here to download the sequence:
Link to NCBI Protein BLAST