Transcript Information: R_Transcript_79352.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7410347902689
Replicate 21.6078248066535
Replicate 32.5795875671343
Condition 2: 8 Hour
Replicate 11.2684119229429
Replicate 23.223190175306
Replicate 34.2926106196861
Condition 3: 24 Hour
Replicate 11.8614438292733
Replicate 21.8379382408814
Replicate 32.119755183641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79352.p1 GENE.R_Transcript_79352~~R_Transcript_79352.p1 ORF type:complete len:444 (+),score=75.10 R_Transcript_79352:269-1600(+)
ATGGCTACAGCAGCCTTCAGGTCCACCACAAGAAGGACCTCAATCGGCGACTCCTTTTCTTCTTCTTCCTCATCTTCTTCGTCGAACCGAAACTCCTCATTCCACCGGAGGTCAAGGAGTGTCAGCCGTTTCTCTCACCGTATACTGCCAGACGACACGTCGGAGGACACCTCGGTGAATCGGAAGGGCAAATTCGTCAACACAGTAAGAGGTTCGGGTGTGCCGGAGATAAGCCTCGATGATCTGGCCATTGAGCTTTTCTCGTCTAGCGATTTCGGAGATAGTAGAGGTAGGCAGCAGAAGAAGGTGACGTCAGCTGACGTCAATGATGATACGACGTCTTGCAGAAGGAGAGGGAGGTCGGTTTCGAGGCGAGGTTCAAGAGTTGGTGAATTGAGAAATAATTTGAGTGACAAGAATGGCGGTAATAATATTAATGAGAGGGTTTCTGATGGAAATTCCAGGAGGAGGAGGTCGCTTTCGGTGGTTTCTCATTCTCGCCTAATTAGCGATTCTGAGAATGAACATTTTCTTAAAAACAGAAGCCGTGCCAACCCCAAAGATCTTAGCACTTGGAACAAAGAGAGACCTTCAGTGCAGAAACCAACAAATTCAAATCAACAGAGTGGATTACGGAGATGTTCTAGCCAGAAAGATTTCTTGAGATCAAACGATGGTTATTCTAGCTATGCCTCAACACTAACTGATGACGAAGGAATCGATGCACTTTATGGTGCTAATAGGGTTGAACCTGCAATAAGAGTTTCCTATGCACAACCTAAGGGTACTGCTGGAAATTGCGATGGTGTGCAGCCAACAGACTCTGACGTTCTTAAGGTTGTTTCTACTGTGAGGAAGAATTACAGGACAAAATTGGAACAGTCTGAAAAGCGTAAGCAAGAACTGCTTGCTGAAATATTGTTGGAGGAAGAGCGTGGTAATGAACTCAAAGAGATTGTTGGAGAATTGCGTTCCAGTCCTAAAGAAACTGCTGCTGCTAGAAGACTTATACGAGGCCGAAAGGATGCAACTGCTGAAGAAGATCTTGACCGAAGTGTCACTTCCAAGAGTAGTCGTGGGAGTTGGAGCCCTGGAGTTGTCAATAGCTTCTCTGTAGACACTCGAGAATTTAGCAGCGCTGTAGAGGTTGATAGCTGCAAAAGTCAACTTCTATCCCAAGTACCAAGAAGATCTCGAGTAGACATAGGCGAGTATCTAAAACCTCCAAGCAATGAAGATTTCCTTTCAGAACGATGGAAACAGCGAGAAAGATTAAACTCGGGTGGTCTCCTAATTTGTAACAGTGGTTCTCCGGGGACATTTTTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79352.p1 GENE.R_Transcript_79352~~R_Transcript_79352.p1 ORF type:complete len:444 (+),score=75.10 R_Transcript_79352:269-1600(+)
MATAAFRSTTRRTSIGDSFSSSSSSSSSNRNSSFHRRSRSVSRFSHRILPDDTSEDTSVNRKGKFVNTVRGSGVPEISLDDLAIELFSSSDFGDSRGRQQKKVTSADVNDDTTSCRRRGRSVSRRGSRVGELRNNLSDKNGGNNINERVSDGNSRRRRSLSVVSHSRLISDSENEHFLKNRSRANPKDLSTWNKERPSVQKPTNSNQQSGLRRCSSQKDFLRSNDGYSSYASTLTDDEGIDALYGANRVEPAIRVSYAQPKGTAGNCDGVQPTDSDVLKVVSTVRKNYRTKLEQSEKRKQELLAEILLEEERGNELKEIVGELRSSPKETAAARRLIRGRKDATAEEDLDRSVTSKSSRGSWSPGVVNSFSVDTREFSSAVEVDSCKSQLLSQVPRRSRVDIGEYLKPPSNEDFLSERWKQRERLNSGGLLICNSGSPGTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST