Transcript Information: R_Transcript_79353.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value8E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2246146760407
Replicate 29.2564335168626
Replicate 39.4418452457259
Condition 2: 8 Hour
Replicate 17.021036544013
Replicate 27.9345064597755
Replicate 38.7179778606877
Condition 3: 24 Hour
Replicate 19.504038475985
Replicate 27.8260596063339
Replicate 38.6687862648823


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79353.p1 GENE.R_Transcript_79353~~R_Transcript_79353.p1 ORF type:complete len:558 (+),score=106.62 R_Transcript_79353:269-1942(+)
ATGGCTACAGCAGCCTTCAGGTCCACCACAAGAAGGACCTCAATCGGCGACTCCTTTTCTTCTTCTTCCTCATCTTCTTCGTCGAACCGAAACTCCTCATTCCACCGGAGGTCAAGGAGTGTCAGCCGTTTCTCTCACCGTATACTGCCAGACGACACGTCGGAGGACACCTCGGTGAATCGGAAGGGCAAATTCGTCAACACAGTAAGAGGTTCGGGTGTGCCGGAGATAAGCCTCGATGATCTGGCCATTGAGCTTTTCTCGTCTAGCGATTTCGGAGATAGTAGAGGTAGGCAGCAGAAGAAGGTGACGTCAGCTGACGTCAATGATGATACGACGTCTTGCAGAAGGAGAGGGAGGTCGGTTTCGAGGCGAGGTTCAAGAGTTGGTGAATTGAGAAATAATTTGAGTGACAAGAATGGCGGTAATAATATTAATGAGAGGGTTTCTGATGGAAATTCCAGGAGGAGGAGGTCGCTTTCGGTGGTTTCTCATTCTCGCCTAATTAGCGATTCTGAGAATGAACATTTTCTTAAAAACAGAAGCCGTGCCAACCCCAAAGATCTTAGCACTTGGAACAAAGAGAGACCTTCAGTGCAGAAACCAACAAATTCAAATCAACAGAGTGGATTACGGAGATGTTCTAGCCAGAAAGATTTCTTGAGATCAAACGATGGTTATTCTAGCTATGCCTCAACACTAACTGATGACGAAGGAATCGATGCACTTTATGGTGCTAATAGGGTTGAACCTGCAATAAGAGTTTCCTATGCACAACCTAAGGGTACTGCTGGAAATTGCGATGGTGTGCAGCCAACAGACTCTGACGTTCTTAAGGTTGTTTCTACTGTGAGGAAGAATTACAGGACAAAATTGGAACAGTCTGAAAAGCGTAAGCAAGAACTGCTTGCTGAAATATTGTTGGAGGAAGAGCGTGGTAATGAACTCAAAGAGATTGTTGGAGAATTGCGTTCCAGTCCTAAAGAAACTGCTGCTGCTAGAAGACTTATACGAGGCCGAAAGAGAAGTAAAGATAGAAACAAAGCGTCAAAGCAATTGGTTGAAGAGGCTGAAAAAATTATTGAAGACTTCATCTCTAGTGTTGAAGAGACAGACATCTCATCATTTGATGGTGAAAGGAGCGATACAAGTTCTGTTGTAGGAGGAACAATAAAACCATTGATGCCATATGGAGAGATTGAAAATTTTAGGAGTCCAGTGAGGTCTGATTTGCTCCCTAGCGAGATGGATGGAGTTGTTCTCCCTTGGTTGAAGTGGGAGACTAGTAATGATGGCGCTATCCTTGGTAGTGATAATAAGCAACGTCCTGCAACTCCAAAAACTGTTCTACATGATGCAATGAAGGATGTAACTGTTGAAGAAGATCTTGACCGAAGTGTCACTTCCAAGAGTAGTCGTGGGAGTTGGAGCCCTGGAGTTGTCAATAGCTTCTCTGTAGACACTCGAGAATTTAGCAGCGCTGTAGAGGTTGATAGCTGCAAAAGTCAACTTCTATCCCAAGTACCAAGAAGATCTCGAGTAGACATAGGCGAGTATCTAAAACCTCCAAGCAATGAAGATTTCCTTTCAGAACGATGGAAACAGCGAGAAAGATTAAACTCGGGTGGTCTCCTAATTTGTAACAGTGGTTCTCCGGGGACATTTTTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79353.p1 GENE.R_Transcript_79353~~R_Transcript_79353.p1 ORF type:complete len:558 (+),score=106.62 R_Transcript_79353:269-1942(+)
MATAAFRSTTRRTSIGDSFSSSSSSSSSNRNSSFHRRSRSVSRFSHRILPDDTSEDTSVNRKGKFVNTVRGSGVPEISLDDLAIELFSSSDFGDSRGRQQKKVTSADVNDDTTSCRRRGRSVSRRGSRVGELRNNLSDKNGGNNINERVSDGNSRRRRSLSVVSHSRLISDSENEHFLKNRSRANPKDLSTWNKERPSVQKPTNSNQQSGLRRCSSQKDFLRSNDGYSSYASTLTDDEGIDALYGANRVEPAIRVSYAQPKGTAGNCDGVQPTDSDVLKVVSTVRKNYRTKLEQSEKRKQELLAEILLEEERGNELKEIVGELRSSPKETAAARRLIRGRKRSKDRNKASKQLVEEAEKIIEDFISSVEETDISSFDGERSDTSSVVGGTIKPLMPYGEIENFRSPVRSDLLPSEMDGVVLPWLKWETSNDGAILGSDNKQRPATPKTVLHDAMKDVTVEEDLDRSVTSKSSRGSWSPGVVNSFSVDTREFSSAVEVDSCKSQLLSQVPRRSRVDIGEYLKPPSNEDFLSERWKQRERLNSGGLLICNSGSPGTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST