Transcript Information: R_Transcript_79355.p1


Annotated TAIR IDAT5G20730.1
Annotated Gene NameTranscriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
Annotated Gene Symbol(s)NPH4, MSG1, IAA21, ARF7, TIR5, BIP
Annotation TypeOrtholog
Chromosome Positionchr5:7016704-7021504 | Reverse length=1165
E-Value4.1e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2698433206397
Replicate 22.9940572795804
Replicate 35.292531430158
Condition 2: 8 Hour
Replicate 17.0275316364837
Replicate 28.597234354102
Replicate 315.399380851231
Condition 3: 24 Hour
Replicate 111.396023443355
Replicate 25.8522076839618
Replicate 310.469750436873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79355.p1 GENE.R_Transcript_79355~~R_Transcript_79355.p1 ORF type:3prime_partial len:554 (+),score=131.05,Auxin_resp|PF06507.9|1.5e-35,B3|PF02362.17|1e-22,B3|PF02362.17|4.6e+03,B3|PF02362.17|6.3e+03 R_Transcript_79355:589-2247(+)
ATGAAGGCTCCTTCCAATGGTTTCATGGCCAACCCTGCTGAAGAAGGGAGGGTCATGAACTCAGAGTTATGGCATGCCTGTGCTGGACCACTGGTCTCGGTGCCGCCTGTTGGAAGCCTTGTGGTTTACTTCCCACAAGGCCATAGTGAGCAAGTGGCAGCCTCTATGCAGAAGGAGACTGATAGCATTCCGAGCTATCCCAATCTTCCCTCGAAGTTGATTTGCATGCTCCACAATGTTACACTACATGCTGATCCTGAGACCGATGAGGTTTATGCACAGATGACCCTTCAACCTGTTAATAAGTATGACAGGGATGCTTTGCTGGCATCTGAGATGGCCCTCAAACAAAGTAGGCAGCCTGCAGAGTTCTTCTGTAAAACTCTTACAGCCAGTGACACAAGTACACATGGTGGATTTTCTGTACCCCGTCGAGCTGCTGAGAAAATTTTCCCACCTTTAGATTTCTCTATGCAACCTCCTGCCCAAGAGCTAGTTGCTAAAGATTTACATGGACAGACATGGACGTTCAGACACATTTATCGCGGTCAACCAAAGAGACACTTGCTAACTACAGGATGGAGCGTTTTTGTTAGCTCAAAAAGACTGTTTGCTGGTGATTCTGTTCTCTTCATAAGAGATGAGAAATCACAACTTCTTTTAGGTATAAGGCGTGCAAATAGACAGCAGCCTGCACTTGCATCGTCTGTTATATCCAGTGACAGCATGCATATTGGAATTCTTGCTGCTGCAGCTCATGCTGCAGCTAATAACAGTCCATTTACTATATTCTATAACCCAAGGGCCAGCCCAGCCGAGTTTGTAGTTCCCTTGGCAAAATACAACAAGGCTATGTACACGCAAGTTTCTCTTGGCATGCGATTCAGGATGATGTTTGAAACTGAGGAGTGTGGGGTACGCAGATACATGGGTACTATTACAGGTATCAGTGACCTTGATGCTGTGAGATGGAAGAACTCCCAGTGGCGTAACCTTCAGGTTGGTTGGGATGAATCCACAGCCGGGGAACGTCCAAATCGAGTCTCTATTTGGGACATAGAGCCTGTTGTCACTCCTTTCTACATATGTCCTCCTCCCTTTTTTAGACCAAAGTTTCCTAAGCAACCAGGATTACCAGATGATGATTCTGACATGGAAAACATATTTAAGAGAGGCATGCCATGGCTCGGGGATGATTTTGGTATGAAGGATGTTCCCAACTCGATATTTCCTGGCTTGAGTCTGGTCCAATGGATGAGCATGCAACAAAACAACCAGTTTCCCGGTGGTCAGTCTGGATTCTTCCCATCCATGGTTTCTCCAACCACCTTGCATGGTAGCCTTGGTGCTGATGATCCATCTAAGCTGTTGAACTTTCAAGCTCCATCTTTGTCGTCGTCGAATCTTCAATTCAATAAAGCCGCCCAACAACAGAACCAAATTGGTCAGTTGCAACAGCAACCTGCAACCTGGGCTCAACAGCAACAGCTTCAGCAATTCTTGCAAAGTCCGCTAAATCCTCAACAGCAGCCTCAGCAACAGCAGCAGCGACTGGATCAACAGCCCATGCAACAGCAGTTGCAGAAACAACAGTTACAGCAGCAGCAACAACAGAAGCAACAGCAACTGCAGCAACAGCAGCAACGGCAGCATCAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79355.p1 GENE.R_Transcript_79355~~R_Transcript_79355.p1 ORF type:3prime_partial len:554 (+),score=131.05,Auxin_resp|PF06507.9|1.5e-35,B3|PF02362.17|1e-22,B3|PF02362.17|4.6e+03,B3|PF02362.17|6.3e+03 R_Transcript_79355:589-2247(+)
MKAPSNGFMANPAEEGRVMNSELWHACAGPLVSVPPVGSLVVYFPQGHSEQVAASMQKETDSIPSYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYDRDALLASEMALKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHGQTWTFRHIYRGQPKRHLLTTGWSVFVSSKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALASSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVSLGMRFRMMFETEECGVRRYMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERPNRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGLPDDDSDMENIFKRGMPWLGDDFGMKDVPNSIFPGLSLVQWMSMQQNNQFPGGQSGFFPSMVSPTTLHGSLGADDPSKLLNFQAPSLSSSNLQFNKAAQQQNQIGQLQQQPATWAQQQQLQQFLQSPLNPQQQPQQQQQRLDQQPMQQQLQKQQLQQQQQQKQQQLQQQQQRQHQQ

Click here to download the sequence:
Link to NCBI Protein BLAST