Transcript Information: R_Transcript_79377.p1


Annotated TAIR IDAT5G60790.1
Annotated Gene NameABC transporter family protein
Annotated Gene Symbol(s)ATGCN1, GCN1
Annotation TypeOrtholog
Chromosome Positionchr5:24453760-24455767 | Reverse length=595
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.809714764331
Replicate 240.13483134668
Replicate 354.188392610598
Condition 2: 8 Hour
Replicate 189.563489314548
Replicate 2110.57250753521
Replicate 3141.21286392488
Condition 3: 24 Hour
Replicate 1118.35343692679
Replicate 290.724804518168
Replicate 3116.81968594993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79377.p1 GENE.R_Transcript_79377~~R_Transcript_79377.p1 ORF type:complete len:599 (+),score=144.83,ABC_tran|PF00005.23|8.5e-21,ABC_tran|PF00005.23|3.1e+03,ABC_tran|PF00005.23|1e-21,AAA_21|PF13304.2|0.048,AAA_21|PF13304.2|0.0091,AAA_21|PF13304.2|0.0029,AAA_21|PF13304.2|1.5e-07,ABC_tran_Xtn|PF12848.3|7e+03,ABC_tran_Xtn|PF12848.3|5.7e+03,ABC_tran_Xtn|PF12848.3|6.2e-23,SMC_N|PF02463.15|0.095,SMC_N|PF02463.15|0.68,SMC_N|PF02463.15|0.046,AAA_29|PF13555.2|0.13,AAA_29|PF13555.2|0.0027,AAA_15|PF13175.2|2.8,AAA_15|PF13175.2|15,AAA_15|PF13175.2|1.7e+03,AAA_15|PF13175.2|9.9,AAA_15|PF13175.2|1.7,AAA_17|PF13207.2|0.4,AAA_17|PF13207.2|0.063,AAA_23|PF13476.2|0.15,AAA_23|PF13476.2|4.9e+02,AAA_23|PF13476.2|0.021,MMR_HSR1|PF01926.19|0.7,MMR_HSR1|PF01926.19|0.026,AAA_33|PF13671.2|0.5,AAA_33|PF13671.2|0.15 R_Transcript_79377:199-1995(+)
ATGGTGTCTGACGCAAGCAAGAAGAAGGCAGCTCAGAAGAAGGCGGCAGCTGCCGCCAAGAGAGGAGGAAAAGCCGCCGCAGCTGCAGCCTCGTCAAAGGCGGCTGCTACGGCAGCTACGAATGTTGATAAGGTGGCGGATGGAGTCAGGGATCTTATGTTTTCTGATCGGACTTGTACTGCCGTTCTCTGTTCTCATCCTCTCTCTAGGGATATCAGGATAGAGTCTTTATCAGTGACTTTCCACGGACATGATCTGATAGTTGATTCAATGCTTGAGCTGAACTATGGGAGGCGTTACGGTTTGGTTGGGTTGAATGGCTGTGGGAAATCTACGCTACTCACTGCCATAGGATGCCGTGAGCTTCCAATTCCAGAGCACATGGATATTTATCATCTTACCAGAGAGATTGAAGCCTCAGACATGTCTGCGCTTGAGGCTGTAATATGCTGTGATGAGGAAAGGATGAAGTTGGAGCAAGAAGCCGAACAATTGGCAGCACAGGATGATGGTGGTGGGGATAGACTTGAACGTATATACGAGCGTTTGGATGCTCTGGATGCATCAACTGCTGAAAAGCGTGCTGCTGAGATTCTGTATGGTCTTGGATTTAACAAGATGATGCAGGCAAAAAAGACAAAGGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTGGCACGGTCTTTGTTCATGAATCCTACCATTTTATTGCTGGATGAACCTACAAATCATCTTGACCTTGAAGCTTGTGTTTGGCTGGAGGAGAATCTTAAGAAATTTAACCGTATTCTGGTTGTGGTCTCTCATTCCCAAGATTTCTTGAATGGTGTCTGCACAAACATCATCCACATGCAAAGCAAAAAGCTGAAGTTTTATTCAGGTAATTATGATCAATATGTTCAAACTCGTGCTGAACTTGAGGAGAATCAGATGAAACAATACAAATGGGAGCAGGAGCAAATTGCGTCTATGAAAGAGTATATCGCCCGTTTTGGTCATGGTTCAGCCAAATTAGCCCGGCAGGCACAGAGTAAGGAGAAAACACTTGCAAAGATGGAAAGGGGAGGATTAACAGAGAAGGTTGTCAAAGACAAAGTTCTGGTCTTCCGCTTCACAGATGTGGGAAAGCTTCCCCCTCCAGTTCTGCAGTTTGTTGATGTCTCATTTGGCTATACACCGGAGAATATCCTATACAAAAACCTTGACTTTGGTGTGGACCTTGATTCTAGGGTTGCACTGGTGGGTCCTAATGGAGCTGGGAAGAGTACCCTTTTGAAGCTAATGACGGGGGACTTGGTTTCTACCGATGGCATGGTGCGTCGTCACAATCACTTGAGGATTGCGCAGTACCATCAGCATCTTGCAGACAAGCTTGACTTGAATATGTCTGCTTTACAATATATGATGCGGGAGTATCCTGGAACCGAGGAAGAGAAAATGAGGGCAGCAATAGGTAAGTTTGGGCTTTCTGGCAAAGCTCAGGTGATGCCGATGAAGAACCTATCCGATGGGCAAAAGAGCAGAGTTATATTTGCCTGGCTGGCTTACAGGCAACCCCACATGCTGTTACTAGATGAGCCTACTAACCACTTGGATATTGAAACAATTGATTCGCTGGCTGAGGCATTAAATGAATGGGATGGCGGTATGGTTCTTGTTAGCCATGATTTCAGGCTCATAAACCAGGTGGCTCATGAAATATGGGTTTGTGAGAATCAGACTGTCTCGCGGTGGGGAGGAGATATCATCGACTTCAAGGAGCACCTGAAGAGAAAAGGTGGACTTGGTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79377.p1 GENE.R_Transcript_79377~~R_Transcript_79377.p1 ORF type:complete len:599 (+),score=144.83,ABC_tran|PF00005.23|8.5e-21,ABC_tran|PF00005.23|3.1e+03,ABC_tran|PF00005.23|1e-21,AAA_21|PF13304.2|0.048,AAA_21|PF13304.2|0.0091,AAA_21|PF13304.2|0.0029,AAA_21|PF13304.2|1.5e-07,ABC_tran_Xtn|PF12848.3|7e+03,ABC_tran_Xtn|PF12848.3|5.7e+03,ABC_tran_Xtn|PF12848.3|6.2e-23,SMC_N|PF02463.15|0.095,SMC_N|PF02463.15|0.68,SMC_N|PF02463.15|0.046,AAA_29|PF13555.2|0.13,AAA_29|PF13555.2|0.0027,AAA_15|PF13175.2|2.8,AAA_15|PF13175.2|15,AAA_15|PF13175.2|1.7e+03,AAA_15|PF13175.2|9.9,AAA_15|PF13175.2|1.7,AAA_17|PF13207.2|0.4,AAA_17|PF13207.2|0.063,AAA_23|PF13476.2|0.15,AAA_23|PF13476.2|4.9e+02,AAA_23|PF13476.2|0.021,MMR_HSR1|PF01926.19|0.7,MMR_HSR1|PF01926.19|0.026,AAA_33|PF13671.2|0.5,AAA_33|PF13671.2|0.15 R_Transcript_79377:199-1995(+)
MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAATAATNVDKVADGVRDLMFSDRTCTAVLCSHPLSRDIRIESLSVTFHGHDLIVDSMLELNYGRRYGLVGLNGCGKSTLLTAIGCRELPIPEHMDIYHLTREIEASDMSALEAVICCDEERMKLEQEAEQLAAQDDGGGDRLERIYERLDALDASTAEKRAAEILYGLGFNKMMQAKKTKDFSGGWRMRIALARSLFMNPTILLLDEPTNHLDLEACVWLEENLKKFNRILVVVSHSQDFLNGVCTNIIHMQSKKLKFYSGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFTDVGKLPPPVLQFVDVSFGYTPENILYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVSTDGMVRRHNHLRIAQYHQHLADKLDLNMSALQYMMREYPGTEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQKSRVIFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCENQTVSRWGGDIIDFKEHLKRKGGLGE*

Click here to download the sequence:
Link to NCBI Protein BLAST