Transcript Information: R_Transcript_79496.p1


Annotated TAIR IDAT2G15900.1
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6927390-6932535 | Forward length=994
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3016528473663
Replicate 23.848650076308
Replicate 36.0894110500328
Condition 2: 8 Hour
Replicate 15.3342527284306
Replicate 26.5666313276418
Replicate 38.9538655075613
Condition 3: 24 Hour
Replicate 16.7639604787957
Replicate 24.8047444991949
Replicate 36.2386260000082


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79496.p1 GENE.R_Transcript_79496~~R_Transcript_79496.p1 ORF type:complete len:1042 (+),score=250.58,PXA|PF02194.11|2.6e-41,Nexin_C|PF08628.8|1.7e-29,PX|PF00787.20|3.6e-15 R_Transcript_79496:374-3499(+)
ATGAAGAAGAAGATGGAGACCATTCAGGATCTCATTGAAGAAGCTAAAATTCGGTTCCTTTGGTGGGCCATCTGTATATTCTCCATTACCTATTTCTTATCTCATACAAGTAAATCAATGTGGATGAATGTCCCAATTGCAGCTTTGATTGCGTTGTTTTTGCGCTTTCTAACGACTGAAGTAGAGCTTCGGTGGAAGGTTCCGCAAACCAGCAAACCTACATATCTTTCTTATTTTGAGAAAAAGCAAGTGCCAGTAAAAGATTCCCGTGTCTCTTCAATGCCTCCACCACAAAAATGGAGGAGGAAATTTGATTCACCTGTTGTGGAGGCTGCAGTTGAGGACTTTGTGGATAAAATTATACAGGACTTTGTTACAGACTTATGGTATTCAGATATAACACCTGACAAAGAAGCCCCTGAGCTGATGCGTACGATTATATTGGAGGCTCTCGGAGAAGTTGCCGGAAGAGTAAAGGAAGTGAATCTTGTTGATCTATTAACAAGGGATATAGTGGACTTGATAGGTGATCATATTGAATTGTTTAGAAGAACTCAAGCTTCTATAGGTGTGGATGTCATGGTCACTTTGTCCTCTGAAGAAAGGGACGAAAGATTGAAGCACTATCTTATGGCATCTAATAATCTCCATCCAGCACTGATATCTGCTGAGAGTGAGTACAAGGTTCTGCAGCGGCTTGTGGCTGGATTGCTAGGTGTAGTTTTGAGACCGAGAGAAGCACAGTGTCCTCTTGTGAGGTGCATTGCTCGAGAATTTGTAACTTGCTTGGTAGTGCAACCTATTCTGAATCTTGTTTCTCCAGCGTATGTCAATGAGTTGGTTGAGTTTGTTCTTCTTCACGTCAAAGACATTTTAAATGGAATGGATGGTGATGATCATCCATTCAAGACTGATCATGATCACCCTGCTCCTGAAGGAAGCGGAGAAAGCTGTGGCTCCTCATTTGGGATGCATAAAACCTCCCATGATCCTAAAACTGATATGCTATTAGCTGAGACGGATCTACATAGGGAAATGGCCTTGGAGGCTTCAGAAGGCTTTGCTTCTAGTGCATCCTATACATATGGAGAATCCATGCATCCAAAGGTCGCTGATTGGGCTCGAGTACTGGATGCTGCAACTCAAAGAAGAACTGAAGTTCTTGCTCCTGATAACCTTGAAAACATGTGGGCTATAGGAAGGCATTATAAAGATAAAATCAATAAAACTGCAAAAGGGCATGCTCCTCCTCCAGAAACAGATAACAAAATGATAGTGCGTGTGCCACCGGGTTCAAGTCATATTACCCAAGTTAAAATCGGCAGTGACAATAGGACAATAGTAACTCATGGTTCTGGGAAAGGACCTTCAATGGAAATGGAGTTTATCAATCAAGTGGAAGATACTGATTTTCTCAAAGCTGATGCAAATAAAAGTAGGCTTAAGAGATCGAGCAGTACCTCTGATTTGAGAATTGAACCTGAAGAGAAAAGAGCCAATACTGGTGAAAGCAAAGGGCTTCTAATTGCAGAAGATTTTTATAGTCCTGATCTTGGAAGGCGCAGTGGTGAGGGTAAATCTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCACACTTAACCAAGCTTAAGAGTCGGGTTATAGGGGCTTACTTTGAGAAAATTGGATCCAAGTCTTTTGCTGTGTATTCAATTGCAGTGACTGATGCACAAAATAACACGTGGTTTGTAAAAAGAAGATACCGGAACTTTGAGAGATTGCACCGACATCTTAAGGATATTCCAAATTATAACCTTCATTTGCCCCCCAAAAGGATATTCTCATCCAGCACTGAAGATGCTTTTGTGCATCAGCGCTGTATCCAGCTTGATAAATATCTGCAAGATCTTTTATCAATAGCTAATGTTGCTGAACTGCATGAAGTCTGGGATTTTCTCAGTGCTTCATCGAAGAACTACTCGTTTGGAAAATCACCATCAGTGATGAAAACCCTTGCAGTCAATGTGGATGATGCTGTTGATGATATTGTACGCCAGTTCAAAGGGGTTTCAGATGGTTTAGTCCGAAAAGTTGTAGGTTCATCTTCATACCATGATGATACTCTCACAAGTGTGCCATCAAGGAACTTATCCTTGAATGAAAGTGATTTGAAGATGAATAGTTCAGTGGAGAGTTCTGTGGATACAGTTCATAACATCTCTGATAACGATGAAAGTTTTAGAGATGACAGTCATGACCATGATGCTTTAGATTCTGGTATGAAAGAAAATGGGTGGCATTCAGACAATGAATTGAACTCAAAGAGCTTTCCCCCTCGTATGGTTAAACAAATAGAAGATAGTGCACATTCATCTTCAGAAAAGATGCCAGCCTTAGAAACAAATTTCAACTTAGGTGGAGCAGCTAGCTTGCCAAATATGTCTCATCCTATTGATGATCCTGACGGTATTCCACCTGAGTGGACACCTCCTAATGTGAGTGTGCCTGTGTTGAACTTGGTTGACAAGGTCTTTCAGCTTAACAGAAGAGGCTGGATAAGGAGACAGGTCTTTTGGATCTCGAAGCAAATAATGCAATTAGTCATGGAGGATGCTATTGATGACTGGCTTCTGAGGCAGATTAACTGGCTGAGAAGAGATGATGTTGTTGCCCAAGGAATTCGGTGGGTCAAGGATATCCTGTGGCCAGATGGCAAATTCTTTCTCAAGCTAGAGATCACCGGGGGTGGACTGGATGAAATGGATTCTAAATCGTTTCAAGCTACACCTCGAGCATCCAGAAACAAATCCACCCAACTTGGTTCTTTTGAGATGCAACTTGAGGCAGCTCGAAGAGCTAGTTATGTGAAGGAGTTCCTTTTCCATGGAGCTCCAGCACCCTTGGTTGGTTTGGTCGGCCAAAAGCAGTACAAGCGTTGTGCACGGGATATTTATTTCTTTCTTCAGTCATCAATATGCCTGAAGCAAGTTGCATATGCTGTCCTGGAGCTTTTGCTTGTGGCGATCTTTCCTGAGCTGAAGGACATTGTGGCAGATATTCATCAGGCTCAGACTCAACCTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79496.p1 GENE.R_Transcript_79496~~R_Transcript_79496.p1 ORF type:complete len:1042 (+),score=250.58,PXA|PF02194.11|2.6e-41,Nexin_C|PF08628.8|1.7e-29,PX|PF00787.20|3.6e-15 R_Transcript_79496:374-3499(+)
MKKKMETIQDLIEEAKIRFLWWAICIFSITYFLSHTSKSMWMNVPIAALIALFLRFLTTEVELRWKVPQTSKPTYLSYFEKKQVPVKDSRVSSMPPPQKWRRKFDSPVVEAAVEDFVDKIIQDFVTDLWYSDITPDKEAPELMRTIILEALGEVAGRVKEVNLVDLLTRDIVDLIGDHIELFRRTQASIGVDVMVTLSSEERDERLKHYLMASNNLHPALISAESEYKVLQRLVAGLLGVVLRPREAQCPLVRCIAREFVTCLVVQPILNLVSPAYVNELVEFVLLHVKDILNGMDGDDHPFKTDHDHPAPEGSGESCGSSFGMHKTSHDPKTDMLLAETDLHREMALEASEGFASSASYTYGESMHPKVADWARVLDAATQRRTEVLAPDNLENMWAIGRHYKDKINKTAKGHAPPPETDNKMIVRVPPGSSHITQVKIGSDNRTIVTHGSGKGPSMEMEFINQVEDTDFLKADANKSRLKRSSSTSDLRIEPEEKRANTGESKGLLIAEDFYSPDLGRRSGEGKSNDGSGSLIRNDGSGSLIRNDGSGSLIRNDGSHLTKLKSRVIGAYFEKIGSKSFAVYSIAVTDAQNNTWFVKRRYRNFERLHRHLKDIPNYNLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAELHEVWDFLSASSKNYSFGKSPSVMKTLAVNVDDAVDDIVRQFKGVSDGLVRKVVGSSSYHDDTLTSVPSRNLSLNESDLKMNSSVESSVDTVHNISDNDESFRDDSHDHDALDSGMKENGWHSDNELNSKSFPPRMVKQIEDSAHSSSEKMPALETNFNLGGAASLPNMSHPIDDPDGIPPEWTPPNVSVPVLNLVDKVFQLNRRGWIRRQVFWISKQIMQLVMEDAIDDWLLRQINWLRRDDVVAQGIRWVKDILWPDGKFFLKLEITGGGLDEMDSKSFQATPRASRNKSTQLGSFEMQLEAARRASYVKEFLFHGAPAPLVGLVGQKQYKRCARDIYFFLQSSICLKQVAYAVLELLLVAIFPELKDIVADIHQAQTQPA*

Click here to download the sequence:
Link to NCBI Protein BLAST