Transcript Information: R_Transcript_79501.p1


Annotated TAIR IDAT5G19340.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits to 906 proteins in 61 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other Eukaryotes - 766 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6515371-6516162 | Reverse length=263
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1123606478732
Replicate 27.6021087714183
Replicate 38.1358412841507
Condition 2: 8 Hour
Replicate 17.1768914500546
Replicate 25.3974542375276
Replicate 36.1965843152356
Condition 3: 24 Hour
Replicate 111.003914498796
Replicate 211.103682062153
Replicate 37.1701101560526


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79501.p1 GENE.R_Transcript_79501~~R_Transcript_79501.p1 ORF type:5prime_partial len:290 (+),score=49.50 R_Transcript_79501:3-872(+)
ACAATCGCCCAAAAAAGCATCTCCTCCATCAAAAAAAACTACACTACCTTCTTTAACTCAAAAACCAGAGAGAAAAAACCTCTGATAAAAAAAGATAAGATGGTATCCCCAGAAAGAGCAGAAACAACAACGGCTAGCCCAAGAATATCATTCTCAGCGGAATTTCTGGACGATGAGAGCTTCATTTCCATAAGCCCCAGTTCATCTTTCGACAACGACGAGATCGAACGAGACCCGAAAGATCATCAGTTCGAGTTCCTGTCAACCAAGAACAGCATTGATGGAACAGAGTCAACTATGCTGACGGCCGACGAGCTCTTCTTCGAGGGCAAGCTCCTTCCGTATTGGCAAATGCACCATGCAGCCGACAAGCTCAAAAAAGTCAACCTCAAATCCCAAACAGACGCCGGCGCCGGGAATGGAAAAGATCATCCCCAGCAGGTTTCCCACATTGGGAATGGGATACTTTTGGGCAGGGAACAACAGGAACCAAGGATATGGTTTGTGGATGATGACCCATCACCAAGGCCGCCGAAATGCACGGTTCTATGGAAGGAGTTGCTGAAACTGAAGAAGCACAGGAACTCGACACTGTCACCGTCGTCGTCGTCGTCGAGCTCCAGCTCCAGCTCCAGCTCGTTAGGGGATGCGGCGGCGGCGGAAGCCTCGGTGGAGGAGAGAGAAAAAGATCAGAAGGAGATGAGTAGCAGAGAGAAGCATATTAAGAGGATTAAAAAGGGTTTGGAGAGAACAAGATCAGCTAGTATAAGGATTAGGCCTATGGTTAATGTCCCCATTTGTCAAACTGGTAAGTCCAGTTCTTTGCCTCCCCTGTTTCCACTCAAGAAAGCCAATAAGCTTGATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79501.p1 GENE.R_Transcript_79501~~R_Transcript_79501.p1 ORF type:5prime_partial len:290 (+),score=49.50 R_Transcript_79501:3-872(+)
TIAQKSISSIKKNYTTFFNSKTREKKPLIKKDKMVSPERAETTTASPRISFSAEFLDDESFISISPSSSFDNDEIERDPKDHQFEFLSTKNSIDGTESTMLTADELFFEGKLLPYWQMHHAADKLKKVNLKSQTDAGAGNGKDHPQQVSHIGNGILLGREQQEPRIWFVDDDPSPRPPKCTVLWKELLKLKKHRNSTLSPSSSSSSSSSSSSSLGDAAAAEASVEEREKDQKEMSSREKHIKRIKKGLERTRSASIRIRPMVNVPICQTGKSSSLPPLFPLKKANKLDR*

Click here to download the sequence:
Link to NCBI Protein BLAST