Transcript Information: R_Transcript_7968.p2


Annotated TAIR IDAT4G02730.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1207759-1209066 | Forward length=333
E-Value9E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.39869190535
Replicate 215.730561581734
Replicate 317.598192057996
Condition 2: 8 Hour
Replicate 116.246177060236
Replicate 217.604757767029
Replicate 322.703919315659
Condition 3: 24 Hour
Replicate 120.334057830252
Replicate 219.254591094948
Replicate 317.857587633437


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7968.p2 GENE.R_Transcript_7968~~R_Transcript_7968.p2 ORF type:complete len:315 (+),score=22.06,WD40|PF00400.28|0.0015,WD40|PF00400.28|6e-07,WD40|PF00400.28|4.4e-08,WD40|PF00400.28|1.4e-09,WD40|PF00400.28|99,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.3e-05,WD40_like|PF17005.1|0.2,WD40_like|PF17005.1|0.15,WD40_like|PF17005.1|0.00029,WD40_like|PF17005.1|25,eIF2A|PF08662.7|2.2,eIF2A|PF08662.7|1.9e-05,eIF2A|PF08662.7|5.8,Nup160|PF11715.4|0.012,Nup160|PF11715.4|0.88,Nup160|PF11715.4|1.6,Nup160|PF11715.4|2.7e+02,Ge1_WD40|PF16529.1|13,Ge1_WD40|PF16529.1|7.4,Ge1_WD40|PF16529.1|0.29,Ge1_WD40|PF16529.1|65 R_Transcript_7968:1953-2897(+)
ATGTCATCTGTAGGATCATCGCAAGCACCACCACCCTACCGCCCCTATCGCCCATACAAAACCCTAAAAACCCACAAACGCGCCGTCTCCTGCGTAAAATTCTCCAACGACGGCGAGCTCTTAGCCTCCTCCTCCCTCGACAAAACCCTCGCAATCTTCTCCTTCCAAACCCTAACCCTAATCTCTCTCCTGACCGGCCACTCCGAGGGCATCTCCGACCTCGCCTGGTCCTCCGACAGCCACTACATCTGCTCCGCCTCCGACGACAAGACCCTCCGCATCTGGGACGCACGCGCCGGCGACTGCGTCAAGACGCTACGCGGCCACACCGACTTTGTCTTCTGCGTCAATTTCAACCAGCCATCAAATCTCATCGTTTCGGGTTCGTTCGATGAGACGATCCGGGTCTGGGATGTGAAAACGGGTCGGGCTGTGCATGTGATTAAAGGGCATAGTTTGCCTGTGACGTCGGTGAGTTTTAACCCGGATGGGTCGTTGATTGTTTCGGGTTCTCATGACGGGACTTGTAAGATTTGGGATGCTGCTACTGGAGCTTGCTTGAAGGTCTTGATTGATGATAAACCGGGGGTTAGTTTTGCTAAGTTTTCTCCCAATGGCAAGTTCATTCTTGTTGCCACTCTTGATAATGCCCTGAAACTCTCAAACTTCCTGACTGGGAAATTCTTGAAATGTTATCAAGGTCATGCAAACAAGATTTATTGCATAACCCCAACTTTCTCAGTGACAAATGGGAAGTATATTGTAAGTGGATCAGAAGATCATTGTGTTTACCTGTGGGATCTACAGGGGAAGAACATGCTCCAAAAGCTTGAAGGTCACACTGATACTGTTGTTTCTGTAACATGCCATCCAAAGCGGAATATGATAGCCTCAGCAGGCCTGGACAAGGATAGAACTATCAGGATTTGGGTCCAGGATGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7968.p2 GENE.R_Transcript_7968~~R_Transcript_7968.p2 ORF type:complete len:315 (+),score=22.06,WD40|PF00400.28|0.0015,WD40|PF00400.28|6e-07,WD40|PF00400.28|4.4e-08,WD40|PF00400.28|1.4e-09,WD40|PF00400.28|99,WD40|PF00400.28|4.6e-06,WD40|PF00400.28|6.3e-05,WD40_like|PF17005.1|0.2,WD40_like|PF17005.1|0.15,WD40_like|PF17005.1|0.00029,WD40_like|PF17005.1|25,eIF2A|PF08662.7|2.2,eIF2A|PF08662.7|1.9e-05,eIF2A|PF08662.7|5.8,Nup160|PF11715.4|0.012,Nup160|PF11715.4|0.88,Nup160|PF11715.4|1.6,Nup160|PF11715.4|2.7e+02,Ge1_WD40|PF16529.1|13,Ge1_WD40|PF16529.1|7.4,Ge1_WD40|PF16529.1|0.29,Ge1_WD40|PF16529.1|65 R_Transcript_7968:1953-2897(+)
MSSVGSSQAPPPYRPYRPYKTLKTHKRAVSCVKFSNDGELLASSSLDKTLAIFSFQTLTLISLLTGHSEGISDLAWSSDSHYICSASDDKTLRIWDARAGDCVKTLRGHTDFVFCVNFNQPSNLIVSGSFDETIRVWDVKTGRAVHVIKGHSLPVTSVSFNPDGSLIVSGSHDGTCKIWDAATGACLKVLIDDKPGVSFAKFSPNGKFILVATLDNALKLSNFLTGKFLKCYQGHANKIYCITPTFSVTNGKYIVSGSEDHCVYLWDLQGKNMLQKLEGHTDTVVSVTCHPKRNMIASAGLDKDRTIRIWVQDA*

Click here to download the sequence:
Link to NCBI Protein BLAST