Transcript Information: R_Transcript_79791.p1


Annotated TAIR IDAT4G21705.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11533257-11534817 | Reverse length=492
E-Value9E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3992537175218
Replicate 24.1271353871731
Replicate 35.5081086586168
Condition 2: 8 Hour
Replicate 14.345773740637
Replicate 24.0966501083088
Replicate 35.542476525309
Condition 3: 24 Hour
Replicate 17.1414553017476
Replicate 26.2293479309264
Replicate 37.4351363249384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79791.p1 GENE.R_Transcript_79791~~R_Transcript_79791.p1 ORF type:complete len:524 (+),score=100.14,PPR_2|PF13041.2|76,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|3.6e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0048,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|0.012,PPR|PF01535.16|0.027,PPR|PF01535.16|15,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|2.5e+03,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.4e+02,TPR_12|PF13424.2|5.4e+03,TPR_12|PF13424.2|1.2e+04,TPR_12|PF13424.2|35,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|4.6e+03,TPR_12|PF13424.2|1.3,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|68,PPR_1|PF12854.3|2.7e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|2.1e+03,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|27,TPR_14|PF13428.2|9.5,TPR_11|PF13414.2|6e+02,TPR_11|PF13414.2|1.7e+03,TPR_11|PF13414.2|4.1,TPR_11|PF13414.2|9.4e+03,TPR_11|PF13414.2|0.19 R_Transcript_79791:149-1720(+)
ATGGGGTTTCCCAGAATCTCAATCCTAAAACTCCTACTCTCAAAAACAGCCCTCCAATCCCATAAACCCTTCACAAATCCACAACTCAAATTCACCTTCTTCATTCCTTCCTTAACCACAAGAACATACCATTACCACCCATCAAATGAAACCTTCAAAGATCATTTGAACCAAAGGGTTATTCTTTCTGCAGCTCGTTCACCCAATGAGAGTGTCATTCCTGTCCTTGATTTGTGGGTTCAACAGGGCAATCCACTCAAAGAAACTGACCTTCAACGTCTTGTTCGTACTCTCCGCTCCAAGAAACGTTTCGCCCGTGCCCTCGAGGTCTCTGAGTGGATGATGAGGAAGAAACTGGGCCCTTCGACTTCTGCGAGTAGTCATGCTGTGCAGCTGGATCTCATTGGCAAGGTGCACGGAACTGATGCTGCTGAAAAATATTTCAACGAAGTGGATGTTCCTTCTGAACAGGTTTATGGTGCACTTCTCAATTGCTATGTGAGAGAAGGCCTTGTTGATAAATCGCTCTCTCATTTTAGGAAGATGAAAGTTGTGGGATTAGCTCATAATCCTCTTACTTACAATGGCATTATGACCCTCTATATGAACACCGGTCAAGTTGAGAAAATACCCGAGGTGCTATTAGAGATGGAGAAGGATGGTGTATCCCCAGACAATGTCAGCTATAGAATCTGCCTTAAAGCCTATGAATCAAGATCTGATTTCGCGAGCATGGAGAACCTGCTAAACAAAATAGAAAAGGAACGCCACATCTCCATTGACTGGAGAACATATACAGCAGTGGCTAATTACTTCATAAAAGGTGGTCTTCGTGAAAAAGCAATTCATTACTTGCAGAAAGCAGAAGCTAAAGTAAATAGAGAGGCAGCTGGATATAACCATTTGATTAGTGTTTATGCAAACATTGGAGATGTATCTCAGGTGATGAGGTTGTGGGAGCAGCAGAAAATCACCTGTCAGAGGCAAATTAATGTTGATTTTATGACCATGATGGGCTCTCTGGTTAAGCTTGGTGAGCTCCGAGAGGCCGAAAGAATATTCGAAGATTGGGAATCTTCTAATATGTTTTATGATTTCCGGGTACCTAATGTTCTTTTAATCGGCTATATACAGCAGGGAATGGTCGAGAAAGCTGAAAGGATGCTCGAGGGGATAATCAGTCGAGGAAGGACCCCAGTTCCAAACAGCTGGAGCATCATTGCTACTGGGCACATCAAGAATCAGAACATGGATAAAGCTGCAGAATGCCTGAAGCGAGCCCTTCAACTTGTGACCGAAAACCAGGGCTGGCTGCCTAAACCCGAGCTTATTTCAAGCATACTCAACTGGCTGGCCGAGAACTCAGATGTTGAAGAAGTCGAAGCATTTCTCAAGTTGTTGTCTGTTGCTGTTCCGATGGATCGAGAGATGTACCATACCTTGCTAAAAGCAAATGTTAGATATGGAAGGAAAATTGATGGCATCTTACAGAAGATGAAAGATGATAAAATAGAGGTAGATGACGAAACTGAGAAGATTCTGAGCTCAGCTGCTCAATCAGACCTAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79791.p1 GENE.R_Transcript_79791~~R_Transcript_79791.p1 ORF type:complete len:524 (+),score=100.14,PPR_2|PF13041.2|76,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|1.8,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|3.6e+02,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.0048,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.58,PPR|PF01535.16|0.012,PPR|PF01535.16|0.027,PPR|PF01535.16|15,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|2.5e+03,PPR_3|PF13812.2|3.2e+02,PPR_3|PF13812.2|15,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|0.57,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.4e+02,TPR_12|PF13424.2|5.4e+03,TPR_12|PF13424.2|1.2e+04,TPR_12|PF13424.2|35,TPR_12|PF13424.2|0.22,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|4.6e+03,TPR_12|PF13424.2|1.3,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|36,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|68,PPR_1|PF12854.3|2.7e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|8e+03,TPR_14|PF13428.2|2.1e+03,TPR_14|PF13428.2|4.8e+02,TPR_14|PF13428.2|77,TPR_14|PF13428.2|27,TPR_14|PF13428.2|9.5,TPR_11|PF13414.2|6e+02,TPR_11|PF13414.2|1.7e+03,TPR_11|PF13414.2|4.1,TPR_11|PF13414.2|9.4e+03,TPR_11|PF13414.2|0.19 R_Transcript_79791:149-1720(+)
MGFPRISILKLLLSKTALQSHKPFTNPQLKFTFFIPSLTTRTYHYHPSNETFKDHLNQRVILSAARSPNESVIPVLDLWVQQGNPLKETDLQRLVRTLRSKKRFARALEVSEWMMRKKLGPSTSASSHAVQLDLIGKVHGTDAAEKYFNEVDVPSEQVYGALLNCYVREGLVDKSLSHFRKMKVVGLAHNPLTYNGIMTLYMNTGQVEKIPEVLLEMEKDGVSPDNVSYRICLKAYESRSDFASMENLLNKIEKERHISIDWRTYTAVANYFIKGGLREKAIHYLQKAEAKVNREAAGYNHLISVYANIGDVSQVMRLWEQQKITCQRQINVDFMTMMGSLVKLGELREAERIFEDWESSNMFYDFRVPNVLLIGYIQQGMVEKAERMLEGIISRGRTPVPNSWSIIATGHIKNQNMDKAAECLKRALQLVTENQGWLPKPELISSILNWLAENSDVEEVEAFLKLLSVAVPMDREMYHTLLKANVRYGRKIDGILQKMKDDKIEVDDETEKILSSAAQSDLG*

Click here to download the sequence:
Link to NCBI Protein BLAST