Transcript Information: R_Transcript_79827.p1


Annotated TAIR IDAT3G55080.1
Annotated Gene NameSET domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20411476-20415830 | Reverse length=463
E-Value2.3E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.746971864951
Replicate 23.0766856055566
Replicate 34.6267073956585
Condition 2: 8 Hour
Replicate 14.460791237914
Replicate 25.1363609773812
Replicate 35.2118485939725
Condition 3: 24 Hour
Replicate 15.1370934984764
Replicate 24.3237042181528
Replicate 35.6778006217496


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79827.p1 GENE.R_Transcript_79827~~R_Transcript_79827.p1 ORF type:5prime_partial len:505 (+),score=78.97,SET|PF00856.24|4.9e-10,Rubis-subs-bind|PF09273.7|2.1e-09 R_Transcript_79827:2-1516(+)
CACAAACTCTTCTTTTTTCATTCGCTAAAACGATTAAAAAAAAAAAAATCTCCGTGTCTCAAATTCTCAATGCTTTCATCCACACGAGCTCTCAACTCAGCTCCCTTCCCACGTTCTATCTTCGTTCTCTCTCATCATTTTCTCTTCAGATTCCATCATCGCGTTCCTCCTGCTGCACTCAAGGTCGTGAAGTGTAGAGATGAAGATTGCGATGATTTCTTGCCTTGGTTGGAGAACAAGGCCGGAATGGAGATTTCTTCTGTCCTTTCTATCGGAAAATCTAAATTCGGCAGGTCCTTGTTTGCTTGTAGAAACATACAAGCTGGAGAATGCCTGTTAAGAGTTCCTTTTGATGTGCAAATATCTCCTGATAATATGGTCCCTGAAATTAAGAGCTTGCTTGGTGACGAAGTTGGAGACTTTGGAGTCACTGCAAAGCTTGCAGTTGTTCTTCTGTTTGAGCAGAGAAAGGGTCAGGATTCTGAATGGGCACCTTATGTAACTTGTCTTCCTCAACCTGAAGAGATGCATAGCACGATATTTTGGAGCGAAGTTGAGCTTGAGATGATACGACCAAGTTCAGTATATCAGGAAACAATTGATCATCAAGCGCAAATTAGAAAGGACTATTTGGCAATTAAACCAGTTTTTGATCGCATTCCTATATTTGAGGATGTTACTCTTCAAGCCTTCAAATATGCCTATGGTTTAGTCAGCTCTCGAGCATGGGGAAGCATGAACGGATTATCATTGATTCCATTTGCAGACTTTTTAAATCATGATGGAATGTCAAATTCTGTAGTATTATGTGATGAAGATAAACAAATTTCTGAGGTTATTGCCAGCCGGAATTATGTTCAAGGTGAAGAGGTCTTTATACGATATGGCAAGTTCCCTAACTGTACACTTCTGTTGGACTTTGGATTTGCAGTTCCTTTCAACATTCATGATCAGGTTTGCATCGATGTTGAGATACCTTATCATGATCCACTACGAGCAATGAAATTGGACCTTCTACATAAGCATTGTTTGCCAAAGATTAAGGATGCGAGATTTAGCTCTGCAGGTGGATCTTTCGTGCTAAAAAAAGTGAGGTCTTCGAAAGGAAAGGGGAAGGGAATTCCACAGTCACTTCGTGCATTTGCTCGTGTCCTATGTTGCTCCTCTCCGCAAGAACTGAATGACCTGGCAACGGAAGCCTCTCAAAATGATGGCCGATTGGCACGACTTCCTTTGACTGACAGAAGCCTGGAGACACATGCACATCAGATCCTACTTTTGCTGATTGAAGAGTTGATTGATGAATATGTTGAGTTAGTTAAGTCTCTACGTAAGCTGAAATCCACCAACCACGACATGGACTCACTTAGACGACAAATGGCCCTGGAACTCCTTGCTGGTGAGGTTGATGTCTTGAGATCTGCTTCTGCATGGTTGAAGAATTACTGTTTTTCTCTTCAAGAACATAGGGGAGAGATCAGTAGGCTGAATTCCAAAATACTGCAAGAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79827.p1 GENE.R_Transcript_79827~~R_Transcript_79827.p1 ORF type:5prime_partial len:505 (+),score=78.97,SET|PF00856.24|4.9e-10,Rubis-subs-bind|PF09273.7|2.1e-09 R_Transcript_79827:2-1516(+)
HKLFFFHSLKRLKKKKSPCLKFSMLSSTRALNSAPFPRSIFVLSHHFLFRFHHRVPPAALKVVKCRDEDCDDFLPWLENKAGMEISSVLSIGKSKFGRSLFACRNIQAGECLLRVPFDVQISPDNMVPEIKSLLGDEVGDFGVTAKLAVVLLFEQRKGQDSEWAPYVTCLPQPEEMHSTIFWSEVELEMIRPSSVYQETIDHQAQIRKDYLAIKPVFDRIPIFEDVTLQAFKYAYGLVSSRAWGSMNGLSLIPFADFLNHDGMSNSVVLCDEDKQISEVIASRNYVQGEEVFIRYGKFPNCTLLLDFGFAVPFNIHDQVCIDVEIPYHDPLRAMKLDLLHKHCLPKIKDARFSSAGGSFVLKKVRSSKGKGKGIPQSLRAFARVLCCSSPQELNDLATEASQNDGRLARLPLTDRSLETHAHQILLLLIEELIDEYVELVKSLRKLKSTNHDMDSLRRQMALELLAGEVDVLRSASAWLKNYCFSLQEHRGEISRLNSKILQER*

Click here to download the sequence:
Link to NCBI Protein BLAST