Transcript Information: R_Transcript_79957.p1


Annotated TAIR IDAT5G51350.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20867860-20870621 | Reverse length=895
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.849386716343
Replicate 25.3000369982888
Replicate 38.1792126691763
Condition 2: 8 Hour
Replicate 15.8375147285234
Replicate 27.2365313401895
Replicate 38.6548132623636
Condition 3: 24 Hour
Replicate 18.841356181543
Replicate 24.8060003191981
Replicate 39.066751456061


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79957.p1 GENE.R_Transcript_79957~~R_Transcript_79957.p1 ORF type:complete len:927 (+),score=188.42,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|44,LRR_8|PF13855.2|0.4,LRR_8|PF13855.2|0.00049,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|8e-09,LRR_8|PF13855.2|3.5e+03,LRR_8|PF13855.2|64,LRR_8|PF13855.2|0.78,LRR_8|PF13855.2|2.3e-06,LRR_4|PF12799.3|0.0079,LRR_4|PF12799.3|1.2e+02,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.0038,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|36,LRR_4|PF12799.3|24,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.59,Pkinase_Tyr|PF07714.13|8.7e-17,Pkinase|PF00069.21|1.3e-13,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|27,LRR_1|PF00560.29|57,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.022,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|26,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.2e+03,LRRNT_2|PF08263.8|4.6e-06 R_Transcript_79957:135-2915(+)
ATGGAGATTTCACTAAGCTTCTTCTTGTGCTTAAATTTTGTTTTTCTCGTATCCATGTTTGTCCCAGAAGCAGTTGGAGCTACAGATGTGTTTACTGATGCACTCTTGAGCTTGAAATCTGAGGTTGTTGATCATTACAATGGTTTGGGTGACTGGCTTGTGCCTTCTAGGAAAAACCCACATGAAGAAATAGTGGCTTGTTCTTGGTCAGGTGTTTCTTGCAATAGTAACTCCACTATGGTCATTGGGTTAGACCTCTCAAGAAGAGGCCTTTCTGGTGAAATTTCTGGTACTCAATTTGACGTCTTTGGTGACCTTGTCAACCTCAATCTTAGTCATAATTTGTTTTCTGGAGAACTTCCTGTTTCAATCTTCAATCTCACTAACTTAAGAAGCTTAGACATTAGTAGGAACAATTTTTCTGGTCATTTCCCAAGTGGGGCTTCTGGGCTTCAGAAGCTTATTATGCTTGATGCTTTTAGTAACAGTTTCTCAGGTCCACTACCAGCTGAAGTTTCCCAGATTGAGTCACTGAAAGTTCTCAATTTCGCTGGGAGTTACTTCAGTGGACCAATCCCTTCAGAATATGGCAACTTTAGGAGCTTAGAATACATTCAATTAGCTGGGAATTTTCTTGGTGGTGAAATTCCTCCTGACCTGGGAAAGCTTCAAACAATGACTCATATGGAAATTGGGTACAATTCTTACAAAGGAGGCATCCCTTGGCAACTGGGTAACATGAGTCAGCTTCAGTATCTTGATATTGCTGGTGCTAATCTCTCAGGTCCAATCCCAAAAGAGCTTAGCAATTTGACTAAACTTGAGTCTCTTTTTCTCTTCAGAAACCAGCTTAATGGGGAAATCCAATCAGAGTTCAGTAAGTTAGTTTCTCTCAAGAGTTTGGATCTTTCTGACAATCAACTTTCTGGAGAAATCCCAGAGAGCTTTTCTGAGCTGAAGAAACTAAGTTTACTCAGCCTAATGTACAATCAAATGAGTGGCATTGTTCCACAAGCTATAGGTGATCTTCCCATGTTAGAAACTCTTCTCATATGGGACAACTTCTTCTCTGGTTCTCTTCCACGTAACTTGGGAATCAACTCAGAGCTGAAATTGGTGGATGTTTCAACAAACAATCTCAGTGGAAGCATTCCACCTAATTTATGTGCTAATGGCATGCTCTCCAAGGTCATATTGTTCTCTAACAATTTTACGGGTGAGCTTCCCCTGTCTCTCTCAAATTGTTCATCTCTGGTTCGAATTCGATTCGAAGATAATTCTCTCTCGGGTCCTATTTCTCTCAACTTTAACACCCTTTCTGATATCTCTTATGTTGATTTATCAAGAAACAAGTTCATCTGTGGTGTTCCTTCTCATATTACTCAAGCTTCTAAGCTTGAGTACTTTAATGTGTCCGGCAATCCAGAGCTTGGTGGTAGTCTTCCACCAAGTTTATGGTCATTACCAGTTCTTCAGAACTTTTCTGCTTCCTATTGCAATATATCAGGCAATATCCCCCCTTTCCCATATTGCGAATCTCTTAAAGTCATGGAACTCAGTTCAAATCACCTATCAGGAGAAATTCCCGAGTCTATCTCAGATTGTCAGGATATAAGTATCATAGACCTATCTCATAATAATCTCAGTGGTTCAATACCAAAACAGTTGGGGCATTTCACAAGTTTACAAGTGTTTAATGTGTCATTCAATGGTTTGTCAGGCTCAGTTCCACATGGCAACATGTTCAGATTGATGGGCAGCAGTGCCTTTGTGGGGAACCCCAAGTTATGTGGGTTCCCATTGCAACCATGCCCCCCAGGTGAAACACAATTGGTGTGGGTGTTAATTCTATGTGCTGCGGTTGTTGCTTTCATAGCCCTTGCTGTTTCTGGGGTATTTTATATCCAGAAAGGGAAGAGAAAAAGTCAATGGAAAATGGTGTCCTTTAGTGGATTACCTAAATTCACTGCCGATGATGTTCTAAAGAGCTTTGATTCTTTGGAACCAATGCCTTATTCATTAGCAGCATCTCCTATCTGCAAAGTTACACTACCAACAGGGATCACAGTGTCAGTGAAGAAGATTGAATGGGACCTACAGCATTTCAAGGCTATGGAAGAGTACATCATCCAGATGGGGAATGCAAGGCACATGAACCTAACTAGATTGCTTGGGTATTGTTACAACAAGGATCTTGTCTATCTTCTATACGATTACTTGCCCAATGGAACTTTGGCTGACAAGATTTCCATGAAGCGGGATTGGGTTTCTAAGTTCAAGGTAGTGATGGGCATTGCAAAAGGGCTCTGTTTCCTTCATCATGAATGCTACCCAGCAATTCCTCATGGTGATTTGAGGATGAGTAATGTTGTTTTCAATGAAAACATGGAGCCCCAGTTAGCCGAATTTGGTTTCCGATTCTTGATGCAACTCAACAAAGGTTTCTTTCCATCAACATTCTCTAAGATGCAAGGACGTCAATTTCAGGCTGCAGTGAAAGAGGAGCTGTACATGGACGTCTATAACTTCGGGGCAATCATCCTTGAAATCTTAACTGATGGAAGGATGAAAAGTACGTGTCAGAACCTGCAGATCAAGCCAAATGAAGCTCTCTTGGAAGAGATACGCTGTGCAAATGAAGCCGGTCCTCAAGATTCCTCCATGAAGCAAATAAATGTGGTGCTTGAAGTTGCTTTACGCTGCACCAGAGACAGATCATCAGAAAGGCCATCAATGGAGGATGTGTTGAAGATGTTATCTGCATCAAATACCCAAATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79957.p1 GENE.R_Transcript_79957~~R_Transcript_79957.p1 ORF type:complete len:927 (+),score=188.42,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|44,LRR_8|PF13855.2|0.4,LRR_8|PF13855.2|0.00049,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|8e-09,LRR_8|PF13855.2|3.5e+03,LRR_8|PF13855.2|64,LRR_8|PF13855.2|0.78,LRR_8|PF13855.2|2.3e-06,LRR_4|PF12799.3|0.0079,LRR_4|PF12799.3|1.2e+02,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|0.0038,LRR_4|PF12799.3|1.1e+02,LRR_4|PF12799.3|36,LRR_4|PF12799.3|24,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.59,Pkinase_Tyr|PF07714.13|8.7e-17,Pkinase|PF00069.21|1.3e-13,LRR_1|PF00560.29|4.6e+02,LRR_1|PF00560.29|0.6,LRR_1|PF00560.29|3.5e+03,LRR_1|PF00560.29|27,LRR_1|PF00560.29|57,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.022,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|26,LRR_1|PF00560.29|33,LRR_1|PF00560.29|1.2e+03,LRRNT_2|PF08263.8|4.6e-06 R_Transcript_79957:135-2915(+)
MEISLSFFLCLNFVFLVSMFVPEAVGATDVFTDALLSLKSEVVDHYNGLGDWLVPSRKNPHEEIVACSWSGVSCNSNSTMVIGLDLSRRGLSGEISGTQFDVFGDLVNLNLSHNLFSGELPVSIFNLTNLRSLDISRNNFSGHFPSGASGLQKLIMLDAFSNSFSGPLPAEVSQIESLKVLNFAGSYFSGPIPSEYGNFRSLEYIQLAGNFLGGEIPPDLGKLQTMTHMEIGYNSYKGGIPWQLGNMSQLQYLDIAGANLSGPIPKELSNLTKLESLFLFRNQLNGEIQSEFSKLVSLKSLDLSDNQLSGEIPESFSELKKLSLLSLMYNQMSGIVPQAIGDLPMLETLLIWDNFFSGSLPRNLGINSELKLVDVSTNNLSGSIPPNLCANGMLSKVILFSNNFTGELPLSLSNCSSLVRIRFEDNSLSGPISLNFNTLSDISYVDLSRNKFICGVPSHITQASKLEYFNVSGNPELGGSLPPSLWSLPVLQNFSASYCNISGNIPPFPYCESLKVMELSSNHLSGEIPESISDCQDISIIDLSHNNLSGSIPKQLGHFTSLQVFNVSFNGLSGSVPHGNMFRLMGSSAFVGNPKLCGFPLQPCPPGETQLVWVLILCAAVVAFIALAVSGVFYIQKGKRKSQWKMVSFSGLPKFTADDVLKSFDSLEPMPYSLAASPICKVTLPTGITVSVKKIEWDLQHFKAMEEYIIQMGNARHMNLTRLLGYCYNKDLVYLLYDYLPNGTLADKISMKRDWVSKFKVVMGIAKGLCFLHHECYPAIPHGDLRMSNVVFNENMEPQLAEFGFRFLMQLNKGFFPSTFSKMQGRQFQAAVKEELYMDVYNFGAIILEILTDGRMKSTCQNLQIKPNEALLEEIRCANEAGPQDSSMKQINVVLEVALRCTRDRSSERPSMEDVLKMLSASNTQI*

Click here to download the sequence:
Link to NCBI Protein BLAST