Transcript Information: R_Transcript_79973.p1


Annotated TAIR IDAT1G78540.2
Annotated Gene NameSH2 domain protein B
Annotated Gene Symbol(s)SHB
Annotation TypeOrtholog
Chromosome Positionchr1:29541195-29544574 | Reverse length=696
E-Value4.7E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1443065748983
Replicate 23.4303814764656
Replicate 34.2909804229412
Condition 2: 8 Hour
Replicate 14.0349946462362
Replicate 25.4170023615266
Replicate 36.3402808927549
Condition 3: 24 Hour
Replicate 14.7855710840848
Replicate 23.851904369622
Replicate 34.8091294805014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_79973.p1 GENE.R_Transcript_79973~~R_Transcript_79973.p1 ORF type:complete len:710 (+),score=131.15 R_Transcript_79973:142-2271(+)
ATGGGTTTTGAAACAGTCGATGCATTGGGTTATTCACTGTTGAAAGATCTGCACTTTGAGCTTGATGAAAGAATGACTTCTTTTTCTCTTTGTTTCTGGGGTTTTCTCCCAAGCTCTACCCCATTTCCTTGCACAATTCTTCATCAGTTGCACTCGAAGGATCCTTTCCTTTCTCTGAGTGAAGACAAACGATTAATATTTTCGCCGCCTTCTATCTTAACCAGTGAAGCTCCTGATTCCACAAGTGCCATATCATTGGCTAAAATTCCTTCTATAGTTTCGGATGAAGCGTTTCCTCTGGAACAATGGGTTCATCTTGGTTGTGAGGTGTCTCGCAGTACTATTTGTTTTCATATTGATGGAAATATGATGGGAGAAAGATCTTTGGATTCCTCGTCGGTTGAAGATGACTTTCTGAAATTTGGAAGGCTGACTCTATCTGCTATTAGTGAACGAAATCATGCTCTTCATGGTTATGTTTACAATGCAAAACTTTTGCCTTCCACATCATCTATGAAGGAACATCATATTAAGGATCCACCTCTACGATTATGTATTGATACTTCATCTGCTACAGATATTGAAGTGGAATGTGACGGTGTTTGGAGTATAATTGGTGGCAAGGCATCTTCTAGCAAACTGTTCTCTTTGGATGTTGTCTTGTTAGATGCCTTTGGTAAGCCTGCGGACAAGGAATTGGAGGTGGTTGCATCACTCATTTATGCTAGTGACGGGGCACCTGTCGAGAAATCAGAAGATATTGAAACTCCACTCCTGACAGCTTGCAATGGAATTGAATTTCCATCTGGTGATAGACCAAGTAAATTAATAAATGGGCGCACATCTTTCAATCTAAAGATACCTCAGCTCTCGTCAAAGTGTGATAATAAATTGTTTTGCATTGAGTTTATTATCCCGAGAAAAGGAGATTATCCATTCTTCAAGGCATTATCTCCACCAATTCGCTGCATCTCACGGACATGCAATAGTAGGGTCTCCACCATCACGTGGAAAAAGCTTCCATCAGGTACACATCTATTCAATGGATCCAGCTCTCCAATATATGGCAGTGGCTACTCAGAGATGCAACAAAATGCTATCTGTGAAGCAAGACCTAGCCCTCCATCAAAGCGGGTCAAATTAGGACGAGGTAGTCCATTGACAGTCACTGGTGATGCTTCTGCGAAAAGCCCCGATGAAATATGTCACTCATGCACTGTAACAGCAAATAAGGTTCAAAGCACGATTGGGACAAGTTTGGAGTGTATACAAGAAAACTATGGAGGATTAGATAACTCTGCATCAGATTCAGAAAGCATTGGTGCCAGGAATTCAGAGTTGAAGAATTTGCCTCTCAACAGAGAACTAATTTCTGATCTGACCATATTCAGATATTGCCTGGGAGGCTTATCTGAGAGGTCACTCATGCTTAAGGAGATTTCGTCATTTGTTTCCGAGAAAGAAATGGATGAAATGGCAGAACAAGTTGCATTCTTCTCCGGGTGCTCCCACCACAGGTACCAAATTCTGATGGCAAAGAGACTATTAGAGGAAGGAGAAAGAGTTTGGAACTTGATTTCACTAAATAGCCATCAAGTGCAGTGGGATAATGTTGTTTTTGAGATCGAAGAGCACTTTATGAGGATTTCTTGCTGCAGCAATAGATCTCTGACACAACAGGACTTCAATTTTCTAAGGAAAATTTCTGGAGTTCAGGAGTTCATGACCAGGGAGGACTTTGACAAAATGTGGCGGTGGCTATATCCTGTTGCATTTACCTTATCAAGACAAGGAATCAAAGCATTGTGGGCTTGTACATCTCCTAGATGGATTGAGGGATTTGTGACAAAGGAGGAAGTGGAGTATGCACTTCAAAATCCATCGGGAATCCAAGAGCCTGGGACATTCATCTTACGATTTCCTACATTGCGAAGTTGGCCTCACCCGGATGCTGGCAGTTTGGTTGCATCCTATGTTGGAAGAGATTTCTCTTTACACCATAGGCAACTGTCCTTGGACTACAGTTCTGTCAAGTATAACACAGATTCAAAATCACTGGAGGAACTGCTTTTGTCAGAACCTGAGCTTTCTCGAGTAGGACAGATAACAAGGAGTGATTTGACTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_79973.p1 GENE.R_Transcript_79973~~R_Transcript_79973.p1 ORF type:complete len:710 (+),score=131.15 R_Transcript_79973:142-2271(+)
MGFETVDALGYSLLKDLHFELDERMTSFSLCFWGFLPSSTPFPCTILHQLHSKDPFLSLSEDKRLIFSPPSILTSEAPDSTSAISLAKIPSIVSDEAFPLEQWVHLGCEVSRSTICFHIDGNMMGERSLDSSSVEDDFLKFGRLTLSAISERNHALHGYVYNAKLLPSTSSMKEHHIKDPPLRLCIDTSSATDIEVECDGVWSIIGGKASSSKLFSLDVVLLDAFGKPADKELEVVASLIYASDGAPVEKSEDIETPLLTACNGIEFPSGDRPSKLINGRTSFNLKIPQLSSKCDNKLFCIEFIIPRKGDYPFFKALSPPIRCISRTCNSRVSTITWKKLPSGTHLFNGSSSPIYGSGYSEMQQNAICEARPSPPSKRVKLGRGSPLTVTGDASAKSPDEICHSCTVTANKVQSTIGTSLECIQENYGGLDNSASDSESIGARNSELKNLPLNRELISDLTIFRYCLGGLSERSLMLKEISSFVSEKEMDEMAEQVAFFSGCSHHRYQILMAKRLLEEGERVWNLISLNSHQVQWDNVVFEIEEHFMRISCCSNRSLTQQDFNFLRKISGVQEFMTREDFDKMWRWLYPVAFTLSRQGIKALWACTSPRWIEGFVTKEEVEYALQNPSGIQEPGTFILRFPTLRSWPHPDAGSLVASYVGRDFSLHHRQLSLDYSSVKYNTDSKSLEELLLSEPELSRVGQITRSDLTV*

Click here to download the sequence:
Link to NCBI Protein BLAST