Transcript Information: R_Transcript_7998.p1


Annotated TAIR IDAT1G56070.1
Annotated Gene NameRibosomal protein S5/Elongation factor G/III/V family protein
Annotated Gene Symbol(s)LOS1
Annotation TypeOrtholog
Chromosome Positionchr1:20968245-20971077 | Reverse length=843
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1338.63135382581
Replicate 2241.23356058868
Replicate 3289.34683591538
Condition 2: 8 Hour
Replicate 1324.61178068096
Replicate 2350.4882771055
Replicate 3428.36940798207
Condition 3: 24 Hour
Replicate 1427.00433395794
Replicate 2370.94123217031
Replicate 3412.28759373495


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_7998.p1 GENE.R_Transcript_7998~~R_Transcript_7998.p1 ORF type:complete len:844 (+),score=237.87,GTP_EFTU|PF00009.23|2.6e-63,EFG_IV|PF03764.14|1.7e-34,EFG_C|PF00679.20|4.3e-21,EFG_C|PF00679.20|5.4e+03,GTP_EFTU_D2|PF03144.21|1.4e-13,EFG_II|PF14492.2|2.6e-12 R_Transcript_7998:249-2780(+)
ATGGTGAAGTTTACAGCTGATGAGCTCCGTGGGATCATGGACAGAAAAGAGAACATCCGTAACATGTCTGTTATTGCTCATGTCGATCATGGAAAGTCAACACTCACAGATTCCTTGGTCGCTGCTGCTGGTATCATTGCTCAGGAAGTGGCTGGTGATGTGCGTATGACTGATACCCGTGCTGATGAAGCTGAGCGTGGTATCACTATCAAGTCTACTGGAATTTCTCTCTACTATGAGATGACTGATGAAGCATTGAAGAACTACAAGGGAGCGAGAAACGGAAATGAGTACCTTATCAATCTTATTGACTCCCCTGGGCATGTTGACTTCTCGTCTGAAGTCACCGCTGCTCTCCGTATCACTGACGGTGCACTTGTGGTGGTCGACTGTATTGAGGGTGTTTGTGTCCAGACTGAGACTGTCCTCCGTCAGGCTCTTGGTGAAAGGATCAGGCCTGTGCTGACTGTCAACAAGATGGACCGTTGTTTCCTTGAGCTTCAGGTTGATGGAGAGGAGGCTTACACAACTTTCCAGAAGGTTATTGAAAATGCCAATGTCATCATGGCTACATACGAAGACCCCCTTCTTGGTGATGTCATGGTTTACCCTGAGAAAGGGACAGTTGCTTTCTCTGCTGGTCTCCACGGTTGGGCATTCACTCTCTCCAACTTTTCCAAGATGTATGCCTCCAAGTTTGGAGTTGATGAGGCTAAGATGATGGAGCGTCTCTGGGGTGAGAATTTCTTCGACCCAGCCACCAAGAAGTGGACCAGCAAGAACACTGGCTCTCCCACATGTAAGCGTGGATTTGTTCAGTTTTGTTATGAGCCTATCAAGCAGATCATTTCAACTTGCATGAATGATCAGAAGGATAAGCTTTGGCCTATGTTGCAAAAACTTGGAGTCCAGATGAAGGCTGAAGAGAAAGATTTGATGGGAAAGGCACTGATGAAGCGTGTCATGCAGACCTGGTTGCCAGCTAGTACTGCTTTGCTTGAAATGATGATCTATCACTTGCCATCCCCGGCGAAGGCTCAGAAATATCGTGTTGAGAACTTGTATGAAGGGCCAATGGATGACATGTATGCCAATGCCATCAGGAATTGTGATCCTGAGGGTCCTTTGATGCTTTACGTTTCAAAAATGATTCCTGCATCCGACAAGGGTAGGTTCTTTGCCTTCGGTCGTGTGTTCTCTGGAAAGGTGTCAACCGGTTTGAAGGTTAGGATCATGGGTCCTAACTATGTTCCTGGAGAGAAGAAGGATCTTTATGTCAAGAATGTCCAGAGAACTGTCATTTGGATGGGAAAGAAACAGGAGACTGTTGAGGATGTGCCATGTGGTAATACTGTTGCTTTGGTTGGTCTGGATCAATACATCACCAAGAATGCAACTCTGACCAACGAGAAGGAAGTGGATGCCCACCCAATCCGTGCTATGAAGTTCTCTGTCTCACCAGTCGTCCGTGTTGCTGTTCAGTGCAAGGTTGCGTCTGACCTTCCCAAGCTTGTTGAAGGTCTCAAGCGTTTGGCCAAGTCAGATCCTATGGTTGTCTGTACCATTGAAGAGTCTGGTGAGCACATTATTGCTGGTGCTGGAGAACTCCATCTTGAGATTTGTTTGAAGGATCTGCAGGAGGACTTCATGGGTGGTGCTGAGATCATCAAGTCTGACCCTGTTGTGTCCTTCCGTGAAACTGTTCTTGAGAGGTCATGCCGTACTGTGATGAGCAAGTCTCCCAACAAGCACAACCGTCTGTACATGGAGGCTCGCCCTCTGGAGGATGGTCTTGGAGAGGCCATTGATGATGGTCGTATTGGTCCAAGAGACGATCCAAAGAACCGATCCAAGATCTTGGCTGAGGAGTTTGGCTGGGACAAGGATCTTGCAAAGAAGATCTGGTGTTTTGGTCCAGAAACCACCGGCCCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAGTACCTCAATGAAATTAAGGATTCTGTTGTTGCTGGTTTCCAATGGGCATCAAAGGAAGGTGCTTTGGCTGAAGAGAACATGAGAGGAATCTGTTTTGAGGTTTGTGATGTTGTTCTCCACGCTGATGCCATCCATCGTGGAGGTGGTCAGATCATCCCGACTGCTAGGAGGGTCTTCTACGCTTCCCAGTTGACCGCCAAGCCCAGGCTGTTGGAACCCGTCTACCTTGTCGAGATCCAAGCTCCTGAACAAGCTCTTGGTGGTATCTACAGTGTTCTGAACCAGAAACGTGGGCACGTGTTTGAGGAAATGCAGAGGCCTGGTACCCCACTCTACAACATCAAGGCATACCTTCCCGTTATTGAGTCCTTCGGGTTTTCAAGTACCCTGAGAGCCGCAACTTCCGGTCAGGCCTTCCCACAATGTGTGTTCGATCACTGGGACATGATGTCTTCAGACCCTATGGAGCCTGGAAGTCAAGCTGCAAATCTTGTTACAGAGATCCGTAAGAGAAAGGGATTGAAGGAACAAATGACCCCTCTATCTGAATTCGAGGACAAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_7998.p1 GENE.R_Transcript_7998~~R_Transcript_7998.p1 ORF type:complete len:844 (+),score=237.87,GTP_EFTU|PF00009.23|2.6e-63,EFG_IV|PF03764.14|1.7e-34,EFG_C|PF00679.20|4.3e-21,EFG_C|PF00679.20|5.4e+03,GTP_EFTU_D2|PF03144.21|1.4e-13,EFG_II|PF14492.2|2.6e-12 R_Transcript_7998:249-2780(+)
MVKFTADELRGIMDRKENIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDEALKNYKGARNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATYEDPLLGDVMVYPEKGTVAFSAGLHGWAFTLSNFSKMYASKFGVDEAKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIISTCMNDQKDKLWPMLQKLGVQMKAEEKDLMGKALMKRVMQTWLPASTALLEMMIYHLPSPAKAQKYRVENLYEGPMDDMYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVALVGLDQYITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEDGLGEAIDDGRIGPRDDPKNRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPMEPGSQAANLVTEIRKRKGLKEQMTPLSEFEDKL*

Click here to download the sequence:
Link to NCBI Protein BLAST