Transcript Information: R_Transcript_80001.p2


Annotated TAIR IDAT1G70610.1
Annotated Gene Nametransporter associated with antigen processing protein 1
Annotated Gene Symbol(s)ATTAP1, TAP1
Annotation TypeOrtholog
Chromosome Positionchr1:26622086-26626331 | Forward length=700
E-Value6.9E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2780377237622
Replicate 24.1008399250582
Replicate 33.4896983056638
Condition 2: 8 Hour
Replicate 14.3041559477579
Replicate 24.4547069292987
Replicate 34.4669979261109
Condition 3: 24 Hour
Replicate 13.3181205758791
Replicate 23.2738274915701
Replicate 35.1299307859916


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80001.p2 GENE.R_Transcript_80001~~R_Transcript_80001.p2 ORF type:complete len:256 (+),score=48.69,ABC_tran|PF00005.23|2.3e-34,ABC_tran|PF00005.23|8.4e+03,SMC_N|PF02463.15|1.3,SMC_N|PF02463.15|2.6e-06,AAA_21|PF13304.2|1.1e-07 R_Transcript_80001:1898-2665(+)
ATGTTTTATTTGCTGAAAATTCTTTTGATTTTTGCACCATTCTGGGAGTTTAACATGCTCCAATTTAAACATGTGTCTGTACTGCAAGATCTGAACATTTCTATGCATCCCAATGAAGTAATTGCTCTTGTCGGTCTGAGTGGAAGTGGAAAGAGCACAATTGTAAATCTTCTTCTACGTCTTTATGAGCCAACCAGTGGCAAGATACTGATAGATGGCTTCTCTCTAAAAGAATTAGACACGAAATGGTTCAGAGAAAGAATTGGATATGTGGGCCAGGAACCTCGACTTTTCAGAATGGACATAAGCTCAAACATTAAATATGGATGCCCCAGAGATGTCACGCAGGAAGATGTCGAGTGGGCTGCTAAGCAAGCTTTTGCTCATGATTTTATTTCAGCCCTGCCTAATGGTTACAATACAATTGTTGATGATGATCTGCTCAGTGGCGGGCAAAAACAACGAATTGCCATTGCTAGAGCTATCCTTCGGGATCCAAGCATTTTGATCCTCGATGAAGCAACTAGTGCACTGGATGCGGAAAGTGAGCACAATGTTAAGGGTGTTCTGCGTGCAGTAAAAAATGACTCTCAGTCAAGGAGAACTGTCGTAGTAATTGCACATAGGCTTTCTACTATACAAGCTGCAGATAGAATAGTGGTGATGGATAGTGGACAAATTGTTGAGATGGGCAGTCACAAGGAGCTTCTCCTGAAGGAGGGTTTGTATGCAAGATTAACAAGGAGACAAGTGGATGCCGTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80001.p2 GENE.R_Transcript_80001~~R_Transcript_80001.p2 ORF type:complete len:256 (+),score=48.69,ABC_tran|PF00005.23|2.3e-34,ABC_tran|PF00005.23|8.4e+03,SMC_N|PF02463.15|1.3,SMC_N|PF02463.15|2.6e-06,AAA_21|PF13304.2|1.1e-07 R_Transcript_80001:1898-2665(+)
MFYLLKILLIFAPFWEFNMLQFKHVSVLQDLNISMHPNEVIALVGLSGSGKSTIVNLLLRLYEPTSGKILIDGFSLKELDTKWFRERIGYVGQEPRLFRMDISSNIKYGCPRDVTQEDVEWAAKQAFAHDFISALPNGYNTIVDDDLLSGGQKQRIAIARAILRDPSILILDEATSALDAESEHNVKGVLRAVKNDSQSRRTVVVIAHRLSTIQAADRIVVMDSGQIVEMGSHKELLLKEGLYARLTRRQVDAVV*

Click here to download the sequence:
Link to NCBI Protein BLAST