Transcript Information: R_Transcript_80002.p2


Annotated TAIR IDAT1G70610.1
Annotated Gene Nametransporter associated with antigen processing protein 1
Annotated Gene Symbol(s)ATTAP1, TAP1
Annotation TypeHomolog
Chromosome Positionchr1:26622086-26626331 | Forward length=700
E-Value3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0047501442964
Replicate 20.67419313263342
Replicate 31.786305225388
Condition 2: 8 Hour
Replicate 10.33696144422815
Replicate 21.23087422979
Replicate 31.2489640335129
Condition 3: 24 Hour
Replicate 11.1584214656181
Replicate 20.80936729873678
Replicate 31.3052300960076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80002.p2 GENE.R_Transcript_80002~~R_Transcript_80002.p2 ORF type:complete len:218 (+),score=22.56 R_Transcript_80002:46-654(+)
ATGGCTCTCACCGTCTTCACCCTCAAACCACCCTTAACTCTCTCTCATCCTCGCCCTTCATCTCCTTCTCCAATCTTCTTTCTCCACTCCTCACCAAACCCTAACCTCCACCTCCCCTTCCTCTCCTCCTCCTCTTCCCGAACTCGCCGTCACCGTCGGCGGTTCATCCCCGTCAAAGTCAACTCTACCTCAGTAAACGGAATCTCAATCGCTAACACTCCAGAGAAGCAGCAATTGAGCGAAGAAAATGTCGATTTCGGAGGGAGAATTCGAAGCTCGTTTGAGAAATTGCTGTCGATTTTGCCAGGTGGAAGCTGGTGGAGATTATCCGATGAAGAAGTTGACGTTGTTCTTGCGGCGAAGCCTGTAACTGTTTGGAGTGCTCTTCATCGGATGTGGCAACTTGTTTCTAACGATCGTTGGGTCATTTTTGCTGCCTTTTCTGCCCTAATTCTCACTGCGCTTTCGGAGATCTCCATACCACATTACTTGACAGCATCAATATTTTCAGCACAGAGTGGCAAAGTTATGGTCTTTCGTCAAAATGTGGTGCTTTTGGTTATCTTTTGCATCACTGCAGGAATATGCAGGTCAAAATCTTCGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80002.p2 GENE.R_Transcript_80002~~R_Transcript_80002.p2 ORF type:complete len:218 (+),score=22.56 R_Transcript_80002:46-654(+)
MALTVFTLKPPLTLSHPRPSSPSPIFFLHSSPNPNLHLPFLSSSSSRTRRHRRRFIPVKVNSTSVNGISIANTPEKQQLSEENVDFGGRIRSSFEKLLSILPGGSWWRLSDEEVDVVLAAKPVTVWSALHRMWQLVSNDRWVIFAAFSALILTALSEISIPHYLTASIFSAQSGKVMVFRQNVVLLVIFCITAGICRSKSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST