Annotated TAIR ID | AT1G70610.1 |
Annotated Gene Name | transporter associated with antigen processing protein 1 |
Annotated Gene Symbol(s) | ATTAP1, TAP1 |
Annotation Type | Ortholog |
Chromosome Position | chr1:26622086-26626331 | Forward length=700 |
E-Value | 0 |
Replicate 1 | 1.5464314142192 |
Replicate 2 | 0.64155362383133 |
Replicate 3 | 0.50903861324783 |
Replicate 1 | 1.054252518562 |
Replicate 2 | 0.80747628870948 |
Replicate 3 | 1.361370796529 |
Replicate 1 | 1.179776204757 |
Replicate 2 | 0.55138147226443 |
Replicate 3 | 1.398381132774 |
>R_Transcript_80004.p1 GENE.R_Transcript_80004~~R_Transcript_80004.p1 ORF type:complete len:720 (+),score=100.28,ABC_membrane|PF00664.19|1.9e-38,ABC_tran|PF00005.23|4.6e+03,ABC_tran|PF00005.23|2.1e-33,SMC_N|PF02463.15|4.3e+03,SMC_N|PF02463.15|6.7,SMC_N|PF02463.15|1.7e-05,AAA_21|PF13304.2|1.1e-06 R_Transcript_80004:46-2160(+)
ATGGCTCTCACCGTCTTCACCCTCAAACCACCCTTAACTCTCTCTCATCCTCGCCCTTCATCTCCTTCTCCAATCTTCTTTCTCCACTCCTCACCAAACCCTAACCTCCACCTCCCCTTCCTCTCCTCCTCCTTTCCCCGAATTCGCCGTCACCGCCGGCGGTTCGTCCCCGTCAAAGTCAACTCAACCTCAGTAAACGGAATCTCAACCGCTAACACTCCAGAGAAGCAGCAATTGAGCGAAGAAAATGTCGATTTCGGAGGGAGAATTCGAAGCTCGTTTGAGAAATTGCTGTCGATTTTGCCAGGTGGAAGCTGGTGGAGATTATCCGATGAAGACGTTGACGTTGCTCTAGCAGCGAAGCCGGTAACTGTTTGGAGTGCTCTTCATCGGATGTGGCAACTTGTTTCTAACGATCGTTGGGTCATTTTTGCTGCCTTTTCTGCCCTAATTCTCACTGCGCTTTCGGAGATCTCCATACCACATTACTTGACAGCATCAATATTTTCAGCACAGAGTGGCAAAGTTATGGTCTTTCGTCAAAATGTGGTGCTTTTGGTAATCTTTTGCATCACTGCGGGAATATGCAGCGGCATAAGGGGATGCTGTTTCAGCATTGCAAACATGATCCTCGTCAAGAGAATGAGGGAAACATTGTATACTTCTCTTCTCCTTCAGGAAATATCTTTTTTTGATGCTTCAACAGTTGGTGAGCTCACTAGTAGGCTTGGAGCAGATTGTCAGCAAGTATCTCGTGTTATTGGAAATGATCTTAATCTAATATCACGCAACATTTTGCAGGGGGGTGGTGCCTTGATTTACCTGCTAATTTTGTCATGGCCGCTTGGTTTATGCACCTTGGGAATATGTATTACACTTTCTTCAATTATGATAGTTTATGGCCAGTACCAGAAAAAGGCAGCAAAGCTGACACAGGAATTCACTGCCTCTGCTAATGATGTTGCTCAAGAGACGCTATCTTTGATGCGAACAATTAGAGTTTATGGCACAGAAAATCAAGAACTGAAAAGGTACGAGATCTGGCTGCAAAAGTTAGCTGATATAAGCCTGAGACAAAGTACTGCATATGGACTCTGGAACGTTAGCTTCAATACTCTTTATCACTCGACACAGGTCATAGCTGTGCTGATTGGGGGAATGTCTATTCTGTCTGGTCGCCTATCTGCTGAGCTACTTACAAAATTTCTCTTGTACAGTGAATGGCTCATCTACTCCACATGGTGGATAGGGGATAATGTGTCATCATTGATGCAGTCAGTGGGAGCTAGTGAGAAAGTATTTCAGTTGATGGATCTCTTGCCCAGTGATCAGTTCACCTCAGGGGGACTGAAGCCACAGAAACTGACAGGACATATTGATTTTGTGAATGTGTCATTCTACTATCCTACAAGGCCAGAGGTGTCTGTATTGCAAGATCTGAACATTTCTATGCATCCCAATGAAGTAATTGCTCTTGTCGGTCTGAGTGGAAGTGGAAAGAGCACAATTGTAAATCTTCTTCTACGTCTTTATGAGCCAACCAGTGGCAAGATACTGATAGATGGCTTCTCTCTAAAAGAATTAGACACGAAATGGTTCAGAGAAAGAATTGGATATGTGGGCCAGGAACCTCGACTTTTCAGAATGGACATAAGCTCAAACATTAAATATGGATGCCCCAGAGATGTCACGCAGGAAGATGTCGAGTGGGCTGCTAAGCAAGCTTTTGCTCATGATTTTATTTCAGCCCTGCCTAATGGTTACAATACAATTGTTGATGATGATCTGCTCAGTGGCGGGCAAAAACAACGAATTGCCATTGCTAGAGCTATCCTTCGGGATCCAAGCATTTTGATCCTCGATGAAGCAACTAGTGCACTGGATGCGGAAAGTGAGCACAATGTTAAGGGTGTTCTGCGTGCAGTAAAAAATGACTCTCAGTCAAGGAGAACTGTCGTAGTAATTGCACATAGGCTTTCTACTATACAAGCTGCAGATAGAATAGTGGTGATGGATAGTGGACAAATTGTTGAGATGGGCAGTCACAAGGAGCTTCTCCTGAAGGAGGGTTTGTATGCAAGATTAACAAGGAGACAAGTGGATGCCGTGGTGTGA
Click here to download the sequence:
Link to NCBI Nucleotide BLAST
>R_Transcript_80004.p1 GENE.R_Transcript_80004~~R_Transcript_80004.p1 ORF type:complete len:720 (+),score=100.28,ABC_membrane|PF00664.19|1.9e-38,ABC_tran|PF00005.23|4.6e+03,ABC_tran|PF00005.23|2.1e-33,SMC_N|PF02463.15|4.3e+03,SMC_N|PF02463.15|6.7,SMC_N|PF02463.15|1.7e-05,AAA_21|PF13304.2|1.1e-06 R_Transcript_80004:46-2160(+)
MALTVFTLKPPLTLSHPRPSSPSPIFFLHSSPNPNLHLPFLSSSFPRIRRHRRRFVPVKVNSTSVNGISTANTPEKQQLSEENVDFGGRIRSSFEKLLSILPGGSWWRLSDEDVDVALAAKPVTVWSALHRMWQLVSNDRWVIFAAFSALILTALSEISIPHYLTASIFSAQSGKVMVFRQNVVLLVIFCITAGICSGIRGCCFSIANMILVKRMRETLYTSLLLQEISFFDASTVGELTSRLGADCQQVSRVIGNDLNLISRNILQGGGALIYLLILSWPLGLCTLGICITLSSIMIVYGQYQKKAAKLTQEFTASANDVAQETLSLMRTIRVYGTENQELKRYEIWLQKLADISLRQSTAYGLWNVSFNTLYHSTQVIAVLIGGMSILSGRLSAELLTKFLLYSEWLIYSTWWIGDNVSSLMQSVGASEKVFQLMDLLPSDQFTSGGLKPQKLTGHIDFVNVSFYYPTRPEVSVLQDLNISMHPNEVIALVGLSGSGKSTIVNLLLRLYEPTSGKILIDGFSLKELDTKWFRERIGYVGQEPRLFRMDISSNIKYGCPRDVTQEDVEWAAKQAFAHDFISALPNGYNTIVDDDLLSGGQKQRIAIARAILRDPSILILDEATSALDAESEHNVKGVLRAVKNDSQSRRTVVVIAHRLSTIQAADRIVVMDSGQIVEMGSHKELLLKEGLYARLTRRQVDAVV*
Click here to download the sequence:
Link to NCBI Protein BLAST