Transcript Information: R_Transcript_80005.p1


Annotated TAIR IDAT1G70610.1
Annotated Gene Nametransporter associated with antigen processing protein 1
Annotated Gene Symbol(s)ATTAP1, TAP1
Annotation TypeOrtholog
Chromosome Positionchr1:26622086-26626331 | Forward length=700
E-Value4.6E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1598871509688
Replicate 21.1235478483638
Replicate 31.1491674379341
Condition 2: 8 Hour
Replicate 12.2110981724937
Replicate 22.4679234139101
Replicate 32.4890168409226
Condition 3: 24 Hour
Replicate 11.8427671353341
Replicate 22.5817192681278
Replicate 32.1228877455519


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80005.p1 GENE.R_Transcript_80005~~R_Transcript_80005.p1 ORF type:complete len:299 (+),score=34.63,ABC_membrane|PF00664.19|4.6e-37 R_Transcript_80005:630-1526(+)
ATGCAGGTCAAAATCTTCGGCATAAGGGGATGCTGTTTCAGCATTGCAAACATGATCCTCGTCAAGAGAATGAGGGAAACATTGTATACTTCTCTTCTCCTTCAGGAAATATCTTTTTTTGATGCTTCAACAGTTGGTGAGCTCACTAGTAGGCTTGGAGCAGATTGTCAGCAAGTATCTCGTGTTATTGGAAATGATCTTAATCTAATATCACGCAACATTTTGCAGGGGGGTGGTGCCTTGATTTACCTGCTAATTTTGTCATGGCCGCTTGGTTTATGCACCTTGGGAATATGTATTACACTTTCTTCAATTATGATAGTTTATGGCCAGTACCAGAAAAAGGCAGCAAAGCTGACACAGGAATTCACTGCCTCTGCTAATGATGTTGCTCAAGAGACGCTATCTTTGATGCGAACAATTAGAGTTTATGGCACAGAAAATCAAGAACTGAAAAGGTACGAGATCTGGCTGCAAAAGTTAGCTGATATAAGCCTGAGACAAAGTACTGCATATGGACTCTGGAACGTTAGCTTCAATACTCTTTATCACTCGACACAGGTCATAGCTGTGCTGATTGGGGGAATGTCTATTCTGTCTGGTCGCCTATCTGCTGAGCTACTTACAAAATTTCTCTTGTACAGTGAATGGCTCATCTACTCCACATGGTGGATAGGGGATAATGTGTCATCATTGATGCAGTCAGTGGGAGCTAGTGAGAAAGTATTTCAGTTGATGGATCTCTTGCCCAGTGATCAGTTCACCTCAGGGGGACTGAAGCCACAGAAACTGACAGGACATATTGATTTTGTGAATGTGTCATTCTACTATCCTACAAGGCCAGAGGTACCTCTAGCACTGGGCTTGATAGTATTGCTCTATTCACTTTTTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80005.p1 GENE.R_Transcript_80005~~R_Transcript_80005.p1 ORF type:complete len:299 (+),score=34.63,ABC_membrane|PF00664.19|4.6e-37 R_Transcript_80005:630-1526(+)
MQVKIFGIRGCCFSIANMILVKRMRETLYTSLLLQEISFFDASTVGELTSRLGADCQQVSRVIGNDLNLISRNILQGGGALIYLLILSWPLGLCTLGICITLSSIMIVYGQYQKKAAKLTQEFTASANDVAQETLSLMRTIRVYGTENQELKRYEIWLQKLADISLRQSTAYGLWNVSFNTLYHSTQVIAVLIGGMSILSGRLSAELLTKFLLYSEWLIYSTWWIGDNVSSLMQSVGASEKVFQLMDLLPSDQFTSGGLKPQKLTGHIDFVNVSFYYPTRPEVPLALGLIVLLYSLFC*

Click here to download the sequence:
Link to NCBI Protein BLAST