Transcript Information: R_Transcript_80021.p1


Annotated TAIR IDAT3G25980.1
Annotated Gene NameDNA-binding HORMA family protein
Annotated Gene Symbol(s)MAD2
Annotation TypeOrtholog
Chromosome Positionchr3:9503232-9504402 | Forward length=209
E-Value4.2E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.022372331308
Replicate 241.992600832596
Replicate 346.118898360254
Condition 2: 8 Hour
Replicate 121.221082954279
Replicate 214.708491166646
Replicate 319.20037034512
Condition 3: 24 Hour
Replicate 153.262112768273
Replicate 249.795873406281
Replicate 356.518917435944


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80021.p1 GENE.R_Transcript_80021~~R_Transcript_80021.p1 ORF type:complete len:225 (+),score=55.65,HORMA|PF02301.14|3.2e-23 R_Transcript_80021:54-677(+)
ATGGCTTCAAAGACTATAACTAAAGATATCATCACTCTTCGTGGCTCAGCAGCAATTGTTAGTGAATTCTTTGGGTATGCTGCCAACAGTATTTTGTACAATAGAGGGGTATACCCAGAAGAAAGTTTTGCGAAAGTGAAGAAATATGGTTTGCCAATGCTTCTTACTCAAGATGATGGAGTCAAATCCTTCCTTGCTAACCTTACTTCTCAGCTTTCAGAATGGCTTGAAGCTGGGAAACTACAGAGAGTGGTTCTAGTGATAATGAGTAAATCTACTAATGAAGTTCTTGAGAGGTGGAATTTTAGCATTGAAACTGACAGTGAAGTGGTTGAAAAAGGGGTGTCAAGGGAAAAGAGTGACAAGGAAATCATGAGGGAGATACAAGCAATCATGAGACAAATTGCTTCTAGTATTACTTACTTGCCTTGCCTTGATGAACCTTGTATATTTGATGTGCTGGCATACACAGACAAGGATGTAGCAGCACCCTTCAGTTGGATTGAGAGTGACCCTAAATTGATTTCTAATCCTCAAATGGTGAAACTTCACTCTTTTGATACCAAGATTCACAAAGTTGATACTCTGGTGTCTTACAAGAATGATGAGGATGAAGAAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80021.p1 GENE.R_Transcript_80021~~R_Transcript_80021.p1 ORF type:complete len:225 (+),score=55.65,HORMA|PF02301.14|3.2e-23 R_Transcript_80021:54-677(+)
MASKTITKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFAKVKKYGLPMLLTQDDGVKSFLANLTSQLSEWLEAGKLQRVVLVIMSKSTNEVLERWNFSIETDSEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDEPCIFDVLAYTDKDVAAPFSWIESDPKLISNPQMVKLHSFDTKIHKVDTLVSYKNDEDEEE*

Click here to download the sequence:
Link to NCBI Protein BLAST