Transcript Information: R_Transcript_80062.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value3.7E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8317202712288
Replicate 29.4447026094074
Replicate 37.4506343738351
Condition 2: 8 Hour
Replicate 17.9642605710763
Replicate 223.521481244707
Replicate 337.43377138322
Condition 3: 24 Hour
Replicate 16.7522962434424
Replicate 25.6473673283831
Replicate 36.2103521948982


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80062.p1 GENE.R_Transcript_80062~~R_Transcript_80062.p1 ORF type:complete len:289 (+),score=45.90,Glyco_hydro_16|PF00722.17|1.7e-65,XET_C|PF06955.8|1e-22 R_Transcript_80062:151-1017(+)
ATGGCTGCTCTTTCTGCTACTTCCTTCCTCGTTAATGTCCTCCTACTTGCCTCTTTCATTGCCGCGGCTTCTGCTGCTGGCAACTTGTATCAGAATTTTGACCTCACCTGGGGCGATGGTCGTGCCAAGATCCTGAACAATGGCCAGCTCCTCACCCTCTCCCTTGACAAGACCTCTGGCTCCGGTTTCCAGTCTAAGAACCAATACCTCTTTGGGAAGATCGACATGCAGCTCAAGCTTGTTCCTGGCAACTCTGCTGGCACCGTTACTGCCTACTATTTATCTTCCCAAGGACCTACCCATGATGAGATAGACTTCGAATTCTTGGGCAACGTCACTGGTCAGCCCTACACACTCCACACCAACGTTTTCAGCCAAGGCAAAGGTGGTCGGGAGCAACAGTTCCGCCTCTGGTTTGACCCCACTGCTGACTTCCACACCTATGCTATCCTGTGGAACCCACAAAGAATTATATTTTCAGTAGACGGCACACCCATCAGAGAATTCAGGAACTTGGAATCCATGGGAGTCCCTTTCCCAAAGAACCAGCCAATGAGAATATATTCAAGCCTCTGGAATGCAGACGACTGGGCAACCCAAGGCGGGAGGGTCAAGACAGACTGGAGCAAGGCTCCATTTACAGCTTCTTACAGGAACTTTAATGCTAATGCATGTGTTTGGTCCAATGGCAAATCCTCTTGCAGGGGCTCTGCCTCTGCCTCTGCCTGGATGAACCAGCAACTCGATGCCTCAAGCCAAAATAGGCTGCGATGGGTGCAGAAGAACTTCATGATATACAACTACTGCACTGACACAAAAAGGTTTCCCCAGGGCCTTCCTAAAGAATGCACAGTCTCCAAGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80062.p1 GENE.R_Transcript_80062~~R_Transcript_80062.p1 ORF type:complete len:289 (+),score=45.90,Glyco_hydro_16|PF00722.17|1.7e-65,XET_C|PF06955.8|1e-22 R_Transcript_80062:151-1017(+)
MAALSATSFLVNVLLLASFIAAASAAGNLYQNFDLTWGDGRAKILNNGQLLTLSLDKTSGSGFQSKNQYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVTGQPYTLHTNVFSQGKGGREQQFRLWFDPTADFHTYAILWNPQRIIFSVDGTPIREFRNLESMGVPFPKNQPMRIYSSLWNADDWATQGGRVKTDWSKAPFTASYRNFNANACVWSNGKSSCRGSASASAWMNQQLDASSQNRLRWVQKNFMIYNYCTDTKRFPQGLPKECTVSKF*

Click here to download the sequence:
Link to NCBI Protein BLAST