Transcript Information: R_Transcript_80092.p1


Annotated TAIR IDAT1G71440.1
Annotated Gene Nametubulin folding cofactor E / Pfifferling (PFI)
Annotated Gene Symbol(s)PFI, TFC E
Annotation TypeHomolog
Chromosome Positionchr1:26921271-26924373 | Reverse length=531
E-Value6E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1132386675104
Replicate 20.49056776673594
Replicate 31.5520920333842
Condition 2: 8 Hour
Replicate 12.4600284876905
Replicate 21.9853119391707
Replicate 34.241030518782
Condition 3: 24 Hour
Replicate 14.0229802384996
Replicate 23.1949206804107
Replicate 34.5514152269483


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80092.p1 GENE.R_Transcript_80092~~R_Transcript_80092.p1 ORF type:3prime_partial len:428 (+),score=88.69,CAP_GLY|PF01302.21|4.9e-17,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.00051,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.043,LRR_4|PF12799.3|0.062,LRR_8|PF13855.2|0.014,LRR_8|PF13855.2|4.3e-05,LRR_8|PF13855.2|1.3,LRR_9|PF14580.2|0.017,LRR_9|PF14580.2|0.24 R_Transcript_80092:164-1282(+)
ATGAGTGAAGGGTCAGAACCCAGGTTCAGAATTGGTCAAAGGGTTCATTCAAATGGGGACACTAGGAGAATGGGGACTGTCAAATATATGGGTTCAGTGGAAGGTCATCCTGGGGACTGGGTTGGTGTTGATTGGGACAATGGTGATGGTAAACATGATGGTTCTATTAATGGGGTTAGGTATTTTCAAGCCAAGTCTGAGAAATCTGCCTCTTTTGTTAGACCCACGAATTTGTGTGCTGGCATTACATTTCTAGAAGCTCTTGTTCTTCGGTATCGAGGAGAAACCACAAAGGAAGAAGAAGATGAAATGTATGTCCTCTCAGCAACCAACAAAAGAGTGTCAGTTCAGCTTGTTGGCAAAGATAAAATTCAGAATAAATTGAGTCATTTTGAAGAGTTGGGCAGTGCCTCATTAGCTTATCTTGGGGTTAACTCTGCTGGACCTCCATTGCAAATCAGTTCGCTAACACCAAACCTGAAGGAGCTTGATTTAACTGGAAACTTGCTCTCAGAATGGAAGGACATTGGAGCTATCTGCCATGAGCTACCAGCTCTTGTGGCATTGAATTTATCCAACAATCTTTTGACGCAGGATTTGACTTGCCTACCAATCCTGACAAACATCCGTGTTCTAGTGCTAAATTATACTGGTCTAAAATGGAGACAGGTTGAGTTGCTCAAAGATCATGTACCATCTATCGAGGAGTTGCATCTAATGGGAAATGAAATCAGTGAGATAACGCCCTCTTCATCAAAATTTGTTCAAGGGTTTGATTCTCTACACATTTTGAATTTGGAGGAAAACTGTATTTCTGAGTGGGATGAGATAGTGAAGCTATCTGAGCTATCTAGCTTGGAGCAGCTTCATTTAAACAAGAACAAATTGAGGCAAGTGTTTTATCCATCTAGCAATGCCGCAGACACGTCATTGACCAATGAAGCTTTTCAAAATTTACGTTGCCTTCTTCTCGGTTCTAACAGCATTTCAGATGTTGAGTCTGTTGACTCAGTAAATTCTTTCCCACAACTAACAGATGTTAGGCTGTCTGAGAATCCTATTGTTGACCCTGGAAGAGGTGGAGTCCCAAGGTTTGTTGTGATTGCAAGACTATCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80092.p1 GENE.R_Transcript_80092~~R_Transcript_80092.p1 ORF type:3prime_partial len:428 (+),score=88.69,CAP_GLY|PF01302.21|4.9e-17,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.00051,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.043,LRR_4|PF12799.3|0.062,LRR_8|PF13855.2|0.014,LRR_8|PF13855.2|4.3e-05,LRR_8|PF13855.2|1.3,LRR_9|PF14580.2|0.017,LRR_9|PF14580.2|0.24 R_Transcript_80092:164-1282(+)
MSEGSEPRFRIGQRVHSNGDTRRMGTVKYMGSVEGHPGDWVGVDWDNGDGKHDGSINGVRYFQAKSEKSASFVRPTNLCAGITFLEALVLRYRGETTKEEEDEMYVLSATNKRVSVQLVGKDKIQNKLSHFEELGSASLAYLGVNSAGPPLQISSLTPNLKELDLTGNLLSEWKDIGAICHELPALVALNLSNNLLTQDLTCLPILTNIRVLVLNYTGLKWRQVELLKDHVPSIEELHLMGNEISEITPSSSKFVQGFDSLHILNLEENCISEWDEIVKLSELSSLEQLHLNKNKLRQVFYPSSNAADTSLTNEAFQNLRCLLLGSNSISDVESVDSVNSFPQLTDVRLSENPIVDPGRGGVPRFVVIARLSK

Click here to download the sequence:
Link to NCBI Protein BLAST