Transcript Information: R_Transcript_80144.p1


Annotated TAIR IDAT3G15120.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5088487-5095482 | Reverse length=1954
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0872133765982
Replicate 22.3656209094374
Replicate 33.0130695274723
Condition 2: 8 Hour
Replicate 13.4583809251635
Replicate 23.3752274477261
Replicate 34.5207784941341
Condition 3: 24 Hour
Replicate 15.3217558533222
Replicate 23.9235770533102
Replicate 34.9085095146896


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80144.p1 GENE.R_Transcript_80144~~R_Transcript_80144.p1 ORF type:complete len:1855 (+),score=395.23,AAA|PF00004.25|2.1e-38,AAA|PF00004.25|3.9,zf-HC5HC2H|PF13771.2|6.8e-11,zf-HC5HC2H|PF13771.2|7.2e+03,zf-HC5HC2H_2|PF13832.2|5.4e-08 R_Transcript_80144:416-5980(+)
ATGCGATTGTCTCAATCGGCTTCCATTTCCTCACCAAAAGGAGGGAACGGTAACCGTTTGGGGAAAAGGACTCGTAAGAAACATAAGAAACTTGATGCCATTACTGAGGATGTATTTAATGAGAACCGTAGGGTTAAGGTTGAGTCCAATGAGTGGGGTGGTAGTAGTAAAGGAGGAGATGATTCAGAGCTTCGTCGAAGCTCGAGGGTGAGGAGGGCACCTGTGATTTTGGATGCATCCCCACCCCCTCCTAGGAAGAGGAGGAAAAAAGATAAATTAGGTAAGAGAACTCGGGGTGGGTCGGTTGAGAAGTCGAGTAGGGGGAAGGGGAAGGTTGAGTTTGAGGATAGTTCTTCGAGTTCTGAGGACTCGTCGAAGGAGGAATCAGGTGCTTGGAAGTCGAGACTGAGATCTAGGGGTAAGAGTTCAGGAAGTGGGAAAAAGCCTCGTGGGAAGAGGAAGCTCTTTATGGATCTTGATGATGAGGAGGAGGATGATGATGAAGTGAAGTCTACGAAGAATGATTTAGAGGAGGATGTGCAGTGCTCCGATGGTGATAAATCGAGGGTGGTGAAGTCTACAAGGTCTGATAGGGTTAGGGCTTTGAGTGATCATGAGGACGAGAGGGATGATGATGATTCAGGAGAGGAGAGTGCGGAAAATTGTGTGGATGAGTTGAGAAATGACAGTGGTGGTGATTTCCCTCCCTTAGAGAGGGGAAAGGATGATCCCAATGAAGATATTTTGGATGGCGTTCCGGTTTGTAAGTTCGAAAAGAAGAGTGAAGCTCCTATAGATACATCTGTACTAGAAAACCAAAATATGAGCGACAATGTGAAAGAATGTGAACAGAATGATGATCCACTGTGTTCCTCCAAGGTTGTTGGGGATGTAGATGATGAAAGCCATTTGGTGGAGGTTGCCATGCATCCCACTGGTCAAGAGGAAGATGAGGGACGTGATGTTGCACACAATGTCTCTGAGGCTGAGGTAAATCACGAGAAAGAAACAAAAGTGACGCATTGCAGTGCCACTGTAGGCGAAATTCACAAATCCCGTATAAAGGAGGGCAGGCGATGTGGTTTATGTGGAGGAGGCACTGATGGAAAGCCTCCAAAGAGATTGGCTAATGATTCCACCGGGAGTGACCATGAAGCTTATAGTGGTTCGTCTGCTTCAGAGGAGTTCACTTATGATGCATGGGATGGATTCGGTGATGAGGCTGGTTGGCTTGGACGGCTATTGGGTCCTATTAATGACCGATATGGCATTGCTGGCATTTGGGTTCATCAGCAGTGTGCTGTATGGAGTCCAGAGGTTTATTTCGCAGGCCTAGGATGCTTAAAAAATGTCAGAGCTGCGCTATGCAGAGGAAGGGCATTGAAATGTACACGCTGCGGGAGACCTGGGGCAACTCTTGGGTGTCGCGTGGATCGATGTCCTAAAACTTATCACTTGCCTTGTGCACGCGCTAGTGGATGCGCTTTTGATCACCGAAAATTTCTTATAGCATGCGCAGACCATCGGTATCTCTTCCAACCTCATGGGCCTCAATATTTGGAACGTATAAAGAAGCTAAAAGCTAAGAAAATGAAACTGGAAATGAGAAAGGTGTCGAATGATGCATCACGTAAAGATCTTGAAGCAGAAGAAAAGTGGATGGAGAAGTGTGGGGAGGATGAAGAATTTTTGAGACGTGAAACAAAAAGGCTTCAACGTGATTTGCTAAGAATTGCTCCTGTGTATATTGGCGGCTGCCAATCTGAAGGCGAAAATCTCTTTGAAGGTTGGGAATCTGTTGCAGGACTTCAGGATGTCATTAAATGCATGAAAGAAGTTGTCATTTTGCCTCTCCTATACCCTGAGTTCTTTGAGAATGTGGGAATTAAACCACCTAGAGGTGTACTTTTGCATGGTTATCCTGGGACAGGAAAAACTCTAGTTGTGCGAGCACTGATTGGTGCCTGTGCCCGTGGTGATAAACGAATAGCTTATTTTGCCCGCAAAGGTGCTGATTGTTTGGGAAAATATGTTGGTGATGCAGAGCGCCAACTGAGGCTTTTGTTCCAAGTTGCAGAGAAATCTCAGCCATCGATAATTTTCTTTGATGAGATTGATGGACTGGCACCTGTTCGTACAAGGCAGCAAGATCAGACTCATAGTTCAGTTGTGTCCACGTTGCTTGCCTTAATGGATGGTCTGAAGTCACGAGGCTCTGTTATAGTTATAGGTGCAACAAATCGTCCAGATTCTGTCGATCCAGCTCTGAGACGGCCTGGGAGATTTGACAGGGAGATCTATTTTCCATTACCATCTATGAAGGACAGAGCTGCTATTTTGTCTCTTCACACGAGAAAGTGGCCTAAACCAGTTGCCGGTCCCTTGCTAGAGTGGGTTGCAACCAAAACTGTGGGTTTTGCAGGTGCTGACCTGCAGGCTCTTTGTGCTCAAGCTGCAGTTATTGCATTGAAAAGGAGTTGCTCATGGCAGAAAATTCTTTCATCAGCAGAAAACAATAATGTGGAAGGAAAAAGGCTGCAGCTTCCTGCTTTTGCAGTGGAAGAGAGGGACTGGTTGGAGGCTCTTTCCCTTGCTCCTCCCCCGTGTTCTCGTAGAGAGGCGGGTATGGCTGCTAATGAAGTCCTAGGCTCTCCCCTTCATATACATCTTGTCCCTTGTTTGCTCCAACCTTTGCTGAACTTGATAATTTTACTCTATCTTGATGATCGCCTCTGGCTACCTCGTCGTCTTATGAATGCCGGAGAAGCCGTTAGACGGAGTCTTATTTCATTTACGGAGAGAAGGCAATTGCCAAGTGATAGATGGTGGTGCTATGCTTCTAGTATGGCTCAAGAATCAGAACCGGCAGGAGAGATGGTCAGAAATCTTCTAACTGCAGGCATTTTAGATGGAGATTCTTCTTTCACTGGTCGTGAATTGTTGAATGATGCATCTTCTGGTGACAGCATATTTCCATGTAGAATTGATGTCAATACTTCTGGTATATTCAAAAATTTATGCTATGGCCAATCAAAGAAAACAGGCTACAGAATATTGATAACAGGAGACGCTAGATCTGGTCAAAAGCATCTTGCTTCTTGCCTTCTTCATTGTTTTGTGGGCAGCATTGATGTGCAAAAGATTGATATGGGTACAATTTCGCAAGAGGGGCAAGGCGACATGGAACAAGGCATTTCACATATTTTAATGAAATGTGCCAGTATGAAGTTGTGTGTGATATTCATGCCTAGAATTGATCTGTGGGCCATTGAGAGTGTCCAGAGAATGAGTGAAGCGTCCTCATCAAGTGATGATTGCTGCAATAGAGCTTCTTCGGCATCGTCTCAAATAGATGGTGAAGAGCAGAGTTCTGTGCCAAGTACATCTGAGTTAATAAAAATAGCAGATTCCCAAAATGAGCTTTCGAATGCTTCCCAAACATGGAAGTCTTTCGTAGAGCAGCTCGAATGTATTTGTGTGTCCTCATCCTTGATCATACTGGCTACTTCAGAGCTATCATTTGCCGCACTTCCTGATGATGTACGTCAGTTTTTTGGGAGAGATTCATTAGCATCAGAAGGTTCAGTTAACTCAGAACATGCAACGCCGCGATTTGCTGTTGAGGTCGATGGAGATTTTGACCATGATATGTTGATCCATTCATCTGCGCTAGACTTGTCTAGAGATTTGATTCAACAATATGTACATTTGGTTCACCAGAAAAATCACGTTCATTCACTTTCAAGCATTACATCTGAGGCTCATTCTCAAGGTGAAAGAGATGCTTTGAATCAGAATGTTGATCTTAAATCAGCTGAAGAACCCGGTGCAAAAACACAGTTCTCTGAAGGGTCTCTCACCAAAATCCCAGTTCCACCGGGTTCTAGGAATGGGAAAGGAAAATCAAGCTTATTGCTGGCTATAAGTACTTTTGGATATCAAATTCTAAGGTACCCTCATTTTGCTGAACTCTGTTGGGTCACTTCAAAGTTGAAGGAAGGTCCTAGTGCAGATATTCGTGGTCCTTGGAAAGGATGGCCTTTTAATTCTTGCATCGTACGTCCTTGCAAGTCAACACAGAATGAAACTGTTGTATGCAGTTCCAATATTGTTAAAGGGAAAGACAAGTTTACATTGGTTAGAGGTCTAGTTGCTGTCGGGTTGTCTGCATACAGAGGAACATATACATCTCCAAAAGAAGTTTCCTTGGAGGTTAGGGAAGTCTTACAGCTCCTGGTTTTACAGATTGCTGCTCGGATCCAGTCAGGAAAAGACAGATACCAGTTTATGCGCCTTTTATCACAAGTTGCTTACCTCGAGGACATGGTTAACAACTGGGCACACTCATTGATAAGTTTAGAGCCAGATGCTCAGACAAGAATGATGGAGCCTAAGCTTAGTGGTGGCCAACCTGCAGAAAATCATCAGACTCCAACTGATCATCCTGTGCAAGCAGAAGAGCAGCCAAATAATCAGGATGGGGGCTTGCGGGAACCAGAACTTGTTGATGGCTGTTTGCAGGGATCCGTTCCTGAAAGTTCTGTACCTGCTAATCTAATAACCACTGATGTTAGAGGTGACAATTTGAATGAGTTGCCGAACCCAAATGAAACACCTTCAAATAAAGTGGCATCCCCAGATCATATTGCCCCTGAGAAATGTTATCCAGAAGATGGTGCAAATCTGGATAAGGGCTCTCCAGAACAAGACATGGTCTTGGCGAGTAACCATGTGTCGAACACCCACATTGATCAATCACTTAATCTGATTTCTGATGAGAAGAGCACAGAATGTGAAGCATTAGAGCCCAAACAAAGTGCCATAATGGGTGAAGAAATGCAATATATACAGCAGGGTAGTGAATTTGCTTGTAGAGAATCTTTTGACCAACCAATGGCTGGTGCTGGTAATTCAGATGAACTCAACGCTGTTGGGGTCTGTCAGTCTGATGATGTCTGCCATCACTCTACTACTGTAGTGGTCGATAATGAGAGTCCTACTGAAGCTGCAAAGAACACGTGTGATACCCATCTCTCAGAATCCAAGTGTCCTGAGAGTAGTGATCTTTCGTCAAAGCCTGCAGCTATATGCTCTTACAGTTGTTGCATTGGATGCGTCTCTAAGCTTCATCTATTGGTAAAGACCACAGTCTCGCAAGAGTGGGATGTGTCGAGATCGTGTAGCACAGTGGAAGACATTCATGATCTCGTTTCATCCCTATCGTCAAGTCTTTGTTCAGCTGTTCGAAAGTTCTATCTCAGTCAAGGAAGCAGTAGTTCCCTCAAAGGACAATTGTTGTTCGATTCCCAGGATAACGATGCCTGCCAATGTGAAAGTTCAGAAAATAGATTCACCAGGCTCTTGGAATGTGCTTGTCATCCAGGTCGAGAAGTGAATTTGCCTTTCTGTGACCACCTTGGATTCGTTCCCAGATACATCTTTCGGGATGGTGTTTTAATATCAGCTGAGCCCGACGACAAATTTTCTTTTCATTGTAAATATGATACATTGTGCCTTTGTTCACTGATTGAGTTCTTAGCAATCACCAAGAAGCCTTTAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80144.p1 GENE.R_Transcript_80144~~R_Transcript_80144.p1 ORF type:complete len:1855 (+),score=395.23,AAA|PF00004.25|2.1e-38,AAA|PF00004.25|3.9,zf-HC5HC2H|PF13771.2|6.8e-11,zf-HC5HC2H|PF13771.2|7.2e+03,zf-HC5HC2H_2|PF13832.2|5.4e-08 R_Transcript_80144:416-5980(+)
MRLSQSASISSPKGGNGNRLGKRTRKKHKKLDAITEDVFNENRRVKVESNEWGGSSKGGDDSELRRSSRVRRAPVILDASPPPPRKRRKKDKLGKRTRGGSVEKSSRGKGKVEFEDSSSSSEDSSKEESGAWKSRLRSRGKSSGSGKKPRGKRKLFMDLDDEEEDDDEVKSTKNDLEEDVQCSDGDKSRVVKSTRSDRVRALSDHEDERDDDDSGEESAENCVDELRNDSGGDFPPLERGKDDPNEDILDGVPVCKFEKKSEAPIDTSVLENQNMSDNVKECEQNDDPLCSSKVVGDVDDESHLVEVAMHPTGQEEDEGRDVAHNVSEAEVNHEKETKVTHCSATVGEIHKSRIKEGRRCGLCGGGTDGKPPKRLANDSTGSDHEAYSGSSASEEFTYDAWDGFGDEAGWLGRLLGPINDRYGIAGIWVHQQCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRPGATLGCRVDRCPKTYHLPCARASGCAFDHRKFLIACADHRYLFQPHGPQYLERIKKLKAKKMKLEMRKVSNDASRKDLEAEEKWMEKCGEDEEFLRRETKRLQRDLLRIAPVYIGGCQSEGENLFEGWESVAGLQDVIKCMKEVVILPLLYPEFFENVGIKPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKSQPSIIFFDEIDGLAPVRTRQQDQTHSSVVSTLLALMDGLKSRGSVIVIGATNRPDSVDPALRRPGRFDREIYFPLPSMKDRAAILSLHTRKWPKPVAGPLLEWVATKTVGFAGADLQALCAQAAVIALKRSCSWQKILSSAENNNVEGKRLQLPAFAVEERDWLEALSLAPPPCSRREAGMAANEVLGSPLHIHLVPCLLQPLLNLIILLYLDDRLWLPRRLMNAGEAVRRSLISFTERRQLPSDRWWCYASSMAQESEPAGEMVRNLLTAGILDGDSSFTGRELLNDASSGDSIFPCRIDVNTSGIFKNLCYGQSKKTGYRILITGDARSGQKHLASCLLHCFVGSIDVQKIDMGTISQEGQGDMEQGISHILMKCASMKLCVIFMPRIDLWAIESVQRMSEASSSSDDCCNRASSASSQIDGEEQSSVPSTSELIKIADSQNELSNASQTWKSFVEQLECICVSSSLIILATSELSFAALPDDVRQFFGRDSLASEGSVNSEHATPRFAVEVDGDFDHDMLIHSSALDLSRDLIQQYVHLVHQKNHVHSLSSITSEAHSQGERDALNQNVDLKSAEEPGAKTQFSEGSLTKIPVPPGSRNGKGKSSLLLAISTFGYQILRYPHFAELCWVTSKLKEGPSADIRGPWKGWPFNSCIVRPCKSTQNETVVCSSNIVKGKDKFTLVRGLVAVGLSAYRGTYTSPKEVSLEVREVLQLLVLQIAARIQSGKDRYQFMRLLSQVAYLEDMVNNWAHSLISLEPDAQTRMMEPKLSGGQPAENHQTPTDHPVQAEEQPNNQDGGLREPELVDGCLQGSVPESSVPANLITTDVRGDNLNELPNPNETPSNKVASPDHIAPEKCYPEDGANLDKGSPEQDMVLASNHVSNTHIDQSLNLISDEKSTECEALEPKQSAIMGEEMQYIQQGSEFACRESFDQPMAGAGNSDELNAVGVCQSDDVCHHSTTVVVDNESPTEAAKNTCDTHLSESKCPESSDLSSKPAAICSYSCCIGCVSKLHLLVKTTVSQEWDVSRSCSTVEDIHDLVSSLSSSLCSAVRKFYLSQGSSSSLKGQLLFDSQDNDACQCESSENRFTRLLECACHPGREVNLPFCDHLGFVPRYIFRDGVLISAEPDDKFSFHCKYDTLCLCSLIEFLAITKKPLD*

Click here to download the sequence:
Link to NCBI Protein BLAST