Transcript Information: R_Transcript_80264.p1


Annotated TAIR IDAT3G53720.1
Annotated Gene Namecation/H+ exchanger 20
Annotated Gene Symbol(s)ATCHX20, CHX20
Annotation TypeOrtholog
Chromosome Positionchr3:19905826-19910027 | Reverse length=842
E-Value6.8E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8278508442173
Replicate 23.859003831454
Replicate 33.9385102191013
Condition 2: 8 Hour
Replicate 11.3549490484642
Replicate 20.83963785569669
Replicate 30.68158221697105
Condition 3: 24 Hour
Replicate 16.125106671423
Replicate 22.5280731534654
Replicate 32.2060730020391


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80264.p1 GENE.R_Transcript_80264~~R_Transcript_80264.p1 ORF type:complete len:506 (+),score=35.56,Na_H_Exchanger|PF00999.17|9.1e-60 R_Transcript_80264:104-1621(+)
ATGGCACATCCTATGAATATAAGCTCCATTAAGACCTCCTCTAGTGGGGTTTGGCAAGGTGATAATCCCCTCCATTATGCCTTCCCTTTGCTCATTATTCAAACCATCCTCGTCGTTGGTATCAGCCGCCTTATTGCCTTTTTTCTTAGACCCCTTCGCCAGCCTAAAGTCATTGCCGAGATAGTCGGTGGAATAATGCTAGGACCATCTGCCTTGGGGAGGAACCAGAACTTCCTAAACTGGATATTCCCTTCATGGAGTTCCCCCATCCTTGAGTCCGTTGCCAGCATTGGTCTCCTCTTCTTCCTCTTTCTCGTCGGTCTCGAGCTCGACCTCAGCTCCATCCGCCGCACTGGCCGGAGAGCTTTTCCGATCGCCTTGGCCGGAGTTTCTCTCCCCTTCTCCTTTGCTGCAATCGTAACCCTAGTCCTCCGCCACCACGCCACCACCACGGCGGCCACCAACCACCCTGGTTTCGGCCAAACCCTAGTCTTCCTGGGTGTGGCTTTGTCCATCACAGCCTTCCCTGTGCTAGCTCGCATCCTAGCCGAGCTCAAACTCCTAACCACTGACGTAGGGGAGACTTCTATGGCGGCCGCCGCCTTCAATGACGTGGCCGCCTGGGTATTATTAGCCTTAGCCGTTGCCCTAACAGGCAACGGCTCAAACCATAACCCTTTAACAACCGTGTGGATATTACTATCCACAGTGGCATTCGTGACCTTCATGCTCACACTGGTTAGGCCGGCCATGCGTTGGGTGGCCAAGCAGTGCTCGGCCACCCATGGCGTCATGGACGAGGCCTGGATCTGCTTGACCTTTGCTGGGGTCATGCTTTCAGGGTTCATGACGGACCTTATAGGGATCCATTCCATATTTGGGGCCTTTGTGTTTGGGTTATGCATCCCTAAGGAAGGAGATTTTGCATCTAGGTTGATCAAGAGAATTGAGGATTTTGTGTCTAGTTTGTTGTTACCTTTGTATTTTGCTTCTAGTGGGATGAAGACCAATGTGTCCAAAATCCAAGGTCTCCAAGCGTGGGGCCTACTTGTCTTGGTCACATCAACTGCCTGTGTTGGGAAAATATTAGGGACATTTGTAGTGGCAATGATGTGTATGATCCCCGCTAGGGAGTCCTTGACTTTGGGATTGTTAATGAATACCAAAGGGTTGGTGGAGCTCATTGTTCTCAACATTGGCAGGGAAAAGAAGGTCCTTGATGATGAAATGTTCACCATACTAGTAATAATGGCACTCTTCACCACCTTCATGACCACTCCAATGGTGTTGGCGATCTACAAACCATTGTTCGGAAAAGCCGCTCGAATCCACAACCGCCATCTTAAGCAAGAATCGTCGAAGAAATCCGACGTCGAAAAGGTTCAAGGCTTGAGGGTGCTTTGTTGTGTACATGGTGCAGGAAATGTGTCCTCCATGGTTAACCTCATTGAGCTAATTAGAGGTTCCAAGACTTCTCCTCTTAAAACTTTATGCCATGCATTTGGTGGAGTTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80264.p1 GENE.R_Transcript_80264~~R_Transcript_80264.p1 ORF type:complete len:506 (+),score=35.56,Na_H_Exchanger|PF00999.17|9.1e-60 R_Transcript_80264:104-1621(+)
MAHPMNISSIKTSSSGVWQGDNPLHYAFPLLIIQTILVVGISRLIAFFLRPLRQPKVIAEIVGGIMLGPSALGRNQNFLNWIFPSWSSPILESVASIGLLFFLFLVGLELDLSSIRRTGRRAFPIALAGVSLPFSFAAIVTLVLRHHATTTAATNHPGFGQTLVFLGVALSITAFPVLARILAELKLLTTDVGETSMAAAAFNDVAAWVLLALAVALTGNGSNHNPLTTVWILLSTVAFVTFMLTLVRPAMRWVAKQCSATHGVMDEAWICLTFAGVMLSGFMTDLIGIHSIFGAFVFGLCIPKEGDFASRLIKRIEDFVSSLLLPLYFASSGMKTNVSKIQGLQAWGLLVLVTSTACVGKILGTFVVAMMCMIPARESLTLGLLMNTKGLVELIVLNIGREKKVLDDEMFTILVIMALFTTFMTTPMVLAIYKPLFGKAARIHNRHLKQESSKKSDVEKVQGLRVLCCVHGAGNVSSMVNLIELIRGSKTSPLKTLCHAFGGVH*

Click here to download the sequence:
Link to NCBI Protein BLAST