Transcript Information: R_Transcript_80308.p1


Annotated TAIR IDAT1G55510.1
Annotated Gene Namebranched-chain alpha-keto acid decarboxylase E1 beta subunit
Annotated Gene Symbol(s)BCDH BETA1
Annotation TypeOrtholog
Chromosome Positionchr1:20723482-20725505 | Forward length=352
E-Value2.9E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 158.1234839618
Replicate 252.732643902684
Replicate 360.592015576919
Condition 2: 8 Hour
Replicate 160.142700538625
Replicate 278.108518136492
Replicate 369.762411324437
Condition 3: 24 Hour
Replicate 142.42433501525
Replicate 234.861538246396
Replicate 338.631294447381


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80308.p1 GENE.R_Transcript_80308~~R_Transcript_80308.p1 ORF type:5prime_partial len:217 (+),score=47.12,Transketolase_C|PF02780.16|1.1e-36,Transket_pyr|PF02779.20|6e-17 R_Transcript_80308:1-651(+)
AACTGTGGAGGCTTAACAATAAGGGCTCCATATGGGGCTGTTGGCCATGGTGGACATTATCATTCGCAATCCCCTGAAGCTTTCTTTTGTCATGTTCCTGGTATCAAAGTGGTTGTACCTCGAAGTCCTCAGCAAGCAAAAGGTTTACTGCTGTCGTGTATACGTGATCCAAACCCTGTTGTTTTCTTTGAACCAAAGTCTCTTTACCGTGTTGCAGTAGAAAAGGTCCCTGAGAATGATTACATGTTGCCTTTGTCACATGCAGAGGTGATTAGAGAAGGCAACGACATCACTCTTGTGGGGTGGGGAGCTCAGCTAGCTGTCATGGAAGAAGCCTGTATGGAAGTTGAAAAGGAAGGAATTTCATGTGAGCTTATAGACTTGAGAACCCTTATACCTTGGGATAAGGATACTGTAGAAGCTTCTGTTAAAAAGACTGGAAGGTTACTTATTAGCCATGAAGCTCCGGTAACAGGAGGTTTTGGTGCTGAGATAGCTGCTTCTGTTGTTGAACGGTGCTTCTTGAGGTTGGAAGCTCCTATTGCTCGGATATGTGGCTTAGATACGCCATTTCCACTTGTATTTGAACCATTTTATCTACCCACCAAGAATAAGATATTGGATGCGATCAAATCTACTGTAAATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80308.p1 GENE.R_Transcript_80308~~R_Transcript_80308.p1 ORF type:5prime_partial len:217 (+),score=47.12,Transketolase_C|PF02780.16|1.1e-36,Transket_pyr|PF02779.20|6e-17 R_Transcript_80308:1-651(+)
NCGGLTIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVVPRSPQQAKGLLLSCIRDPNPVVFFEPKSLYRVAVEKVPENDYMLPLSHAEVIREGNDITLVGWGAQLAVMEEACMEVEKEGISCELIDLRTLIPWDKDTVEASVKKTGRLLISHEAPVTGGFGAEIAASVVERCFLRLEAPIARICGLDTPFPLVFEPFYLPTKNKILDAIKSTVNY*

Click here to download the sequence:
Link to NCBI Protein BLAST