Transcript Information: R_Transcript_80316.p1


Annotated TAIR IDAT1G55510.1
Annotated Gene Namebranched-chain alpha-keto acid decarboxylase E1 beta subunit
Annotated Gene Symbol(s)BCDH BETA1
Annotation TypeOrtholog
Chromosome Positionchr1:20723482-20725505 | Forward length=352
E-Value7.7E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0955313899815
Replicate 22.9468491812348
Replicate 32.277278006635
Condition 2: 8 Hour
Replicate 14.7253423582403
Replicate 27.1920964986269
Replicate 39.5534792738879
Condition 3: 24 Hour
Replicate 13.6249169306901
Replicate 21.1608030995041
Replicate 33.711949917661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80316.p1 GENE.R_Transcript_80316~~R_Transcript_80316.p1 ORF type:complete len:171 (+),score=30.33,Transket_pyr|PF02779.20|1.2e-16 R_Transcript_80316:61-573(+)
ATGGAAAACCAAATAATTGGGAGAATTCTAAGGGCAAGGCTGGGATTCGCCTCTGCAACTCGCAAACTATATTGGCCGGCGGCGAAATTATTATCAGTGAAAGGAATTTCTTCATCATCATCATCTTCTTCTTCTTCTTCTTCGTCGTCGTTGTCATCCAGTCCCACAAACACAGACGCAAACACAGTCACAGCCGGGGAAGGGAAGCCAATGAATCTCTTTACAGCCATCAATCAAGCACTTCACATCGCCTTGGAATCTGATCCACGTGCTTATGTTTTCGGAGAAGATGTGGGTTTTGGCGAGGTTTTCCGTTGCACCATTGGACTAGCTGAACGATTTGGCAAACAGAGGGTTTTCAACACCCCTCTTTGTGAGCAGGGCATAGTTGGATTTGGCATTGGTTTGGCAGCAATGGGAAACCGAGCTATTGCTGAAATCCAGTTCGCAGATTACATTTATCCTGCTTTTGATCAGGCAGTATCTTCTCTCATTCTCAATAGTATACAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80316.p1 GENE.R_Transcript_80316~~R_Transcript_80316.p1 ORF type:complete len:171 (+),score=30.33,Transket_pyr|PF02779.20|1.2e-16 R_Transcript_80316:61-573(+)
MENQIIGRILRARLGFASATRKLYWPAAKLLSVKGISSSSSSSSSSSSSSLSSSPTNTDANTVTAGEGKPMNLFTAINQALHIALESDPRAYVFGEDVGFGEVFRCTIGLAERFGKQRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIYPAFDQAVSSLILNSIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST