Transcript Information: R_Transcript_80317.p1


Annotated TAIR IDAT1G55510.1
Annotated Gene Namebranched-chain alpha-keto acid decarboxylase E1 beta subunit
Annotated Gene Symbol(s)BCDH BETA1
Annotation TypeOrtholog
Chromosome Positionchr1:20723482-20725505 | Forward length=352
E-Value7E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5277808728619
Replicate 21.0174418703933
Replicate 31.7154825512537
Condition 2: 8 Hour
Replicate 10.64720347878181
Replicate 23.0536887095892
Replicate 33.0385956104613
Condition 3: 24 Hour
Replicate 11.1124928612544
Replicate 21.7488751543189
Replicate 30.77137285240167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80317.p1 GENE.R_Transcript_80317~~R_Transcript_80317.p1 ORF type:3prime_partial len:227 (+),score=43.02,Transket_pyr|PF02779.20|9.8e-37 R_Transcript_80317:61-738(+)
ATGGAAAACCAAATAATTGGGAGAATTCTAAGGGCAAGGCTGGGATTCGCCTCTGCAACTCGCAAACTATATTGGCCGGCGGCGAAATTATTATCAGTGAAAGGAATTTCTTCATCATCATCATCTTCTTCTTCTTCTTCTTCGTCGTCGTTGTCATCCAGTCCCACAAACACAGACGCAAACACAGTCACAGCCGGGGAAGGGAAGCCAATGAATCTCTTTACAGCCATCAATCAAGCACTTCACATCGCCTTGGAATCTGATCCACGTGCTTATGTTTTCGGAGAAGATGTGGGTTTTGGCGAGGTTTTCCGTTGCACCATTGGACTAGCTGAACGATTTGGCAAACAGAGGGTTTTCAACACCCCTCTTTGTGAGCAGGGCATAGTTGGATTTGGCATTGGTTTGGCAGCAATGGGAAACCGAGCTATTGCTGAAATCCAGTTCGCAGATTACATTTATCCTGCTTTTGATCAGATTGTCAATGAAGCTGCCAAATTCAGATATCGAACTGGAAATCAATTCAACTGTGGAGGCTTAACAATAAGGGCTCCATATGGGGCTGTTGGCCATGGTGGACATTATCATTCGCAATCCCCTGAAGCTTTCTTTTGTCATGTTCCTGGTATCAAAGTGGTTGTACCTCGAAGTCCTCAGCAAGCAAAAGGTTTACTGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80317.p1 GENE.R_Transcript_80317~~R_Transcript_80317.p1 ORF type:3prime_partial len:227 (+),score=43.02,Transket_pyr|PF02779.20|9.8e-37 R_Transcript_80317:61-738(+)
MENQIIGRILRARLGFASATRKLYWPAAKLLSVKGISSSSSSSSSSSSSSLSSSPTNTDANTVTAGEGKPMNLFTAINQALHIALESDPRAYVFGEDVGFGEVFRCTIGLAERFGKQRVFNTPLCEQGIVGFGIGLAAMGNRAIAEIQFADYIYPAFDQIVNEAAKFRYRTGNQFNCGGLTIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVVPRSPQQAKGLLL

Click here to download the sequence:
Link to NCBI Protein BLAST