Transcript Information: R_Transcript_80320.p1


Annotated TAIR IDAT3G01410.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:153650-155439 | Reverse length=294
E-Value8E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.046657032951
Replicate 27.7129266835381
Replicate 39.683606272426
Condition 2: 8 Hour
Replicate 16.7817993294119
Replicate 25.867286780486
Replicate 37.6734213992889
Condition 3: 24 Hour
Replicate 110.374519301149
Replicate 27.7804266057139
Replicate 310.656695867965


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80320.p1 GENE.R_Transcript_80320~~R_Transcript_80320.p1 ORF type:complete len:343 (+),score=66.48,RVT_3|PF13456.2|6.8e-23,RNase_H|PF00075.20|7.8e+03,RNase_H|PF00075.20|2e-09 R_Transcript_80320:194-1222(+)
ATGGGAGATGAAAAGGACGCTTTTTACGTTGTGAGAAAAGGCGACGTCATTGGAATTTATAAGACATTTGCTGATTGCCAAGCTCAAACCGCTTTCTCTCCCCTGCATCCTTCTATATCAGTGTACAAAGGATATTGCTTATCCGAGCAGGCGGAATCATACCTTATCTCACATGGGCTCAAGCAAGCAGCGTATTCAATTAGTGCCTCTGATGTGCAAGATGGAATGTTTGGAGCGCTTTCTGTTTGCCCATTTCAGGATCCTGGTGGTTCTAGCTGCTCATTGGGTCGTATTACGCCAATCCAACCTGTCAATTTTAAGGATTATGACGAAATTCAAGCCTCTATTTCTGCAGGATGTGTAACTAGCTCTTCTACTGCTGAGAGGATCCAGAAGCATGTCGGCACTGGATTGAATTCGTTCTCAGCAAGTCCTCAGCAGAAACATGCTGAGTTGAAGAACTTCATGGAGAGTCAACACCAAGTTCATCCTGTTTCTGTCTCTGGTCAATCAAGTTCAGTCCCAGCTCATCCTCAAAAAAGGCCTGCTGAGTTAAAGAATTATGTGAAGCCACAAGCACTGGTTCGCCAAGCTTGTCAATCCTGTACAATTGAATTTGATGGAGCTTCAAAAGGAAATCCAGGACAAGCTGGTGCAGGAGCTGTTCTACGTGCTGTAGACGGAAGTGCGGTTTGGTTGTTGCGGGAAGGTGTCGGGATTGCAACTAATAATGTTGCTGAATATCGAGCATTGATTTTAGGCTTGAGAACCGCGCTACAAAAAGGATACAAACATGTTCATGTCCGAGGAGACTCTCAACTTGTTTGTTATCAGGTTCAGGGCAAATGGAAAGTAAAACACGAGAACATGGCCAAACTCTGCAAAGAGGCAAAGGAACTGACGAGCCAATTTACCTCATTTGTTATTGACCATGTTCTTAGGGAATTCAATTCTGATGCTGATGCTCAGGCGAACCGAGCCATTAATCTGAGAGATGGTCAAGTTCAAGCTGAATTCAAAGCTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80320.p1 GENE.R_Transcript_80320~~R_Transcript_80320.p1 ORF type:complete len:343 (+),score=66.48,RVT_3|PF13456.2|6.8e-23,RNase_H|PF00075.20|7.8e+03,RNase_H|PF00075.20|2e-09 R_Transcript_80320:194-1222(+)
MGDEKDAFYVVRKGDVIGIYKTFADCQAQTAFSPLHPSISVYKGYCLSEQAESYLISHGLKQAAYSISASDVQDGMFGALSVCPFQDPGGSSCSLGRITPIQPVNFKDYDEIQASISAGCVTSSSTAERIQKHVGTGLNSFSASPQQKHAELKNFMESQHQVHPVSVSGQSSSVPAHPQKRPAELKNYVKPQALVRQACQSCTIEFDGASKGNPGQAGAGAVLRAVDGSAVWLLREGVGIATNNVAEYRALILGLRTALQKGYKHVHVRGDSQLVCYQVQGKWKVKHENMAKLCKEAKELTSQFTSFVIDHVLREFNSDADAQANRAINLRDGQVQAEFKAN*

Click here to download the sequence:
Link to NCBI Protein BLAST