Transcript Information: R_Transcript_80415.p1


Annotated TAIR IDAT1G71015.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26789389-26790061 | Reverse length=195
E-Value3.5E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.142369739427
Replicate 26.7457993305375
Replicate 36.3476501772471
Condition 2: 8 Hour
Replicate 116.913930806932
Replicate 217.960547663603
Replicate 323.837657320749
Condition 3: 24 Hour
Replicate 115.397404847496
Replicate 29.7432870600944
Replicate 318.98692454767


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80415.p1 GENE.R_Transcript_80415~~R_Transcript_80415.p1 ORF type:complete len:249 (+),score=21.30,DUF4228|PF14009.2|3.1e-18 R_Transcript_80415:285-1031(+)
ATGGGGAACAGTTTAGGAAGCAAAAAAACCAAAATTATGAAAATAAATGGGGAAACCATGAAGTTCAAGACCCCTATCCAAGCTAAGGATGTGGTCAAGAATTATCCGGGTCATGTGGTGTTGGACTCGGAGGCCGTGAAGCACTACGGTATTCGGGCCAAACCGGTCGACCCGTTTCATAATCTTGAACCTAAAAGGCTCTACTTCCTAGTAGAGCTCCCCAAATTTCCCCAGGGACAAGACCACACTCACACACACCGGGTCCCTAGACGGGTCCGGTCGGGGATCAACATGTCCGCTAAGGACCGCCTCGAGAGCCTCATTCTCTCAAGGCGGTCCGTGTCGGACCTCTCCATCATGGGGCCCGCCACACGGGTAGTAGTTGATGGACCACATGACGGGTCGGAAAACGGGTCGGGTCCGTTGAGGGTGAGGATGAGGCTACCTAAGTCAGAGGTGGAGAGGTTGATGAGTCAGACTAGAGACCGGGGAGAGATGGCTGAGAAGATTGTGGATCTTTGTACGGTCAAAAATAATAGCGGCGCCGTTGGAAATGGTAATGGTAATGTAAATGGTGCTGCTGGTTGGAAAGGGAAAGAAGTCGCATTTGCTGATCACAACGGTAGTAATATTTTGGATCAGTCGATTTTACGTAAGGCTGGAGCTCGAAGTCAGGCAGGTTACAAGAAGCGGGTAGGTTTCTTGCCAATCCATGAAGGAGAGATTGGGCTTGCCGTTGCCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80415.p1 GENE.R_Transcript_80415~~R_Transcript_80415.p1 ORF type:complete len:249 (+),score=21.30,DUF4228|PF14009.2|3.1e-18 R_Transcript_80415:285-1031(+)
MGNSLGSKKTKIMKINGETMKFKTPIQAKDVVKNYPGHVVLDSEAVKHYGIRAKPVDPFHNLEPKRLYFLVELPKFPQGQDHTHTHRVPRRVRSGINMSAKDRLESLILSRRSVSDLSIMGPATRVVVDGPHDGSENGSGPLRVRMRLPKSEVERLMSQTRDRGEMAEKIVDLCTVKNNSGAVGNGNGNVNGAAGWKGKEVAFADHNGSNILDQSILRKAGARSQAGYKKRVGFLPIHEGEIGLAVAS*

Click here to download the sequence:
Link to NCBI Protein BLAST