Transcript Information: R_Transcript_80419.p1


Annotated TAIR IDAT5G37840.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15062192-15063327 | Reverse length=214
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.20328074401078
Replicate 30.82507321001759
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20
Replicate 30.99489566758624


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80419.p1 GENE.R_Transcript_80419~~R_Transcript_80419.p1 ORF type:internal len:110 (+),score=20.32 R_Transcript_80419:2-328(+)
CTCTCAAGGCGGTCCGTATCTGACCTCTCCATCATGGGGCCCGCTACACGGGTAGTAGTTGATGGACCCCATGATGGGTCGAAAAACGGGTCGGGTCCGTTGAGGGTGAGGATGAGGCTACCTAAGTCAGAGGTGGAGAGGTTGATGAGTCAGAATAGAGACCGGGAAGAGATGGCTGAGAAGATTGTGGATCTTTGTATGGTCAAAAATAATAAAGGTGTCGTTGGGAATGGTAATGGTAATGTAAATGGTGCAGCTGGTTGGAAAGGAAAAGAAGTTGCGTTTGCTGATGACAACGGTAGTAATATTTTGGATCAGTCGATTTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80419.p1 GENE.R_Transcript_80419~~R_Transcript_80419.p1 ORF type:internal len:110 (+),score=20.32 R_Transcript_80419:2-328(+)
LSRRSVSDLSIMGPATRVVVDGPHDGSKNGSGPLRVRMRLPKSEVERLMSQNRDREEMAEKIVDLCMVKNNKGVVGNGNGNVNGAAGWKGKEVAFADDNGSNILDQSIL

Click here to download the sequence:
Link to NCBI Protein BLAST