Transcript Information: R_Transcript_80439.p1


Annotated TAIR IDAT4G02110.1
Annotated Gene Nametranscription coactivators
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:935191-940191 | Forward length=1329
E-Value2.7E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0399668208652
Replicate 22.1647231142975
Replicate 32.3616896007569
Condition 2: 8 Hour
Replicate 12.3303058205021
Replicate 22.450507599034
Replicate 34.0831308677439
Condition 3: 24 Hour
Replicate 14.3863150074561
Replicate 23.8958460188835
Replicate 34.9393306178795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_80439.p1 GENE.R_Transcript_80439~~R_Transcript_80439.p1 ORF type:complete len:1387 (+),score=347.01,PTCB-BRCT|PF12738.3|0.015,PTCB-BRCT|PF12738.3|3.1e-16,PTCB-BRCT|PF12738.3|43,BRCT|PF00533.22|0.047,BRCT|PF00533.22|8.7e-05,BRCT|PF00533.22|9.1e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|3.5e-08,BRCT_2|PF16589.1|4.5e+03,BRCT_2|PF16589.1|0.67,BRCT_2|PF16589.1|0.79,BRCT_2|PF16589.1|21 R_Transcript_80439:207-4367(+)
ATGCAGGGAGGTAGTAACCGGTTGAACCCGTTTTCTGAAGTTCGGTTCTGTCTTTCCGGTTTCGATCTCGATCAACACACCGAGGTGAAAACGGAGCTAGTGAGGGTAGGAGCAGTATTTGTTCCACAGTACGGTCCAAAATGTACTCATGTCATCGTCCACAACCTCACTATTGACGATCCTATTTGTGTTAGAGCTATGAAGGATAAGAAGGTACTCGTTACAAGTTTGTGGGTTGATCATAGTTTAGAAGCGGGTGCACCCTGGGATACTAATGGGATTATATATAGGCCACCTAAGGACCTGAATGGGATTCCAGGTGCTCAAGAATTTGTAATTAGTTTGACTAATTTCCAGCGGCCCCTACGAGACGATGTCATGACAATGGTGAGCTTGATGGGGGCTGAATTTTCTCGGTCACTGAACCCGATGAGTGCTACTCATCTTGTATGCTACAACTTTGAAGGGGAAAAATATATTGTGGCTAAGAAATTCCCAAGAATAAAAGTTGTAAATCACCGATGGTTGGAAGATTGTTTGAAAGCTTGGAAGATTCTTCCTGAGGAGCAATACAGTAAAAGTAGCTATGAATTGGAGATGATGGAAGCTGTGGTTAAAGATTCTCAAGAAGAAACTGGGGATGTTGCTGAAAGCCTGACAGAGGGACAAAACATCAATGCCATCTCTAATTTGCAATGTGAAATGGGGGGACTCCAACCTCATTCTGTGACGTCAAGTAAGGTGACAGGCCCATGTACACTAGAAAAAGTGCCAAATAGTGGGAGTGTTGTTGAGACACAGTTTCCTTTCAAGGAAAAACCAAGGTCTAATCAGGCATTGAAGTCTAGAAACCTTAATCAGATGGATCAGTGCTTTCCAAGGCCCTCTGTACATCAGGATCAAGAGGATGCTAAATCTTATAGTGTTTATGCCCCCAATGTTTTTCTTTCATCTGACCAGATTGGAAATGAGCCTCCATCTACTTCAGGAAATGGTGAAGTTTTAGTCAATTCTGAAGCTGGGAAGTTAGCTGATTTAAGCTGCTCTAAAAAGACACCAACAAGAGACTCTAGTTTTTCACTGCATGTAGGAGAGGACTTGGGAAGCATAAGTAAAGAAAGCTCTAAAAGACTAGCTGATTTTAATAATGGCAAGTGCAGCCCTGCAGGGTCAAGTAAATCTCCAAAGTCTACTCCCTCCTTGCAAACTGCTCAGAAGTTGGGTAACCCTGATGGAAGGTGGGAACAAAATTTAGCTGCGGACGTAAATAGTGATTTGTGCAATTCCAATCTAGAGTCAGGTACAAAAAAGGGTGTATCAGCATGTGTTGGACTATCAACTACAAAACAACTAGGTGATTCTGGTCCTCGCAAGCGTAGTCCGCTGAGCTCGAGAAGGTCAAGTCTATGTTTACAGAATGCGGAAAGGTCGGGCTCTGATGGCAAGTTGCAAGAAAATTTAGCTCAACAAGTTGTCAACATATGCTCCTCTGACCAAGGACTGGCTAATGACAAGGTTGCTCCAGGCCGTGTTGGATTATCAAGTGTGGGAGCTGGTTCAGTTGATGGTAAAGGACCAGGAAGCTTACTGTCAGAAAAGAGGAAGGTAGATGATCATTCAAATGTTTCTTATGACACTCCCAAGTCACAGAAGTTGGCTACATCTGCTAGTAAAAGAATTGATGCAACAGAGCCTACAAGCCCAGTTAGTAGTCCTCTCGAAAAAGGAGGGCTTGTTTCTCTTAATCCTTCCAACGATAATGTTGATGAGACTGCTAAACTATCATCTCCAGAAATTTCACCTCCTAATGTTTCTTCTGTCAAGTCCAAGGCAAAGAATTCTGTTGCCTCCAGAAATTTGACCTCAGAGATGCTTCAAGGCATTAAATCTACGAGTTTGGCAGGTATGGCAAACCCTAACACCAGCAACTTTGCCATGTCTGCTTCACCAGGCATTAGTAATAAGAAAGCAGCGGAGCCTCAGCAGCAAATGATTTCTTCTGGCACCAAGGATCTAGAGATGGCTAAGTCTGCAAGTCCTAAACTGAATGCAGATGATCAAACCAATAGCTCAATTCCAAAGCCAACAAGGAAAAAAACAGTTGCTAGGAAAACTTTGGGTTCCAGACCCAAGTTAACCAAAAGAAGTGCTGCTACTCAGAAAGTTTCTAGCTCCTTTCAAGACGATGCAGCTATGCAGTCAGTTGGTCGGATGGAAGACAACCATGCAGCTTCTTTTACTCCTGATAAACTTATGACAGACGCACCTACAGTGGATGCTGCTGCTGTTAATATGGGGCCTATACCTGTTATAAATTCTGGCAATGAAGCTAATGATTGCTTGGGACCTCTAGAAGATGAGACTGAGGCTCAACCTGAATTGAATGTACAAAATGAGAAGCCTGTGATAGGCAACACTTCACGTTTAGCAGAAAATAGATTCACAGTGGAAGCTGAAGCTACCTTGTCATCTTCTGACAAACTATGTAAACAAAGAGTGCCAGCAGCTGAAACTGGCAATAAAAAGCAAAAGTTGGCAACACAGAAGAAGGGCGTCTCTGGTAAAACAAAGAAAAAAACTGCCCTTGCTGCAAAGGAGTCGCCTGATGGTGCAGATGAGGAGGTAGGTGTAGAAAGCAGCAAGGAGACAGTGACAGAGAAGCAACAGGTTGTATGTGCTCCTGGGAAGAATAGGTGTGGTACTTCAGATGGAGCAGTAGAAGTGGAAAAAGATACCAAGTCCATTGTCGGTAATGATCAAGGTAAAAGTATGGTTGGTAAACACACTGGAAAGTTGGCTGGGAAGAAGAGGCGTGGAACTTTACTGTTGAACAAGTCTGAGGGTCCTGTTGAAGTGGAAGGGGAAAATGAGACAAATCTTGGTCGTGCTGAAGGTAAAGGTAAAGATGAAAGGCACAACTTGGCTGATAAATCCAATTTGACCCAAGAGCCTGTGGAGGCGGATAGAGAAAATTGTTCTATTGTTAATATTGATCAAGGCACAAGTAAAGGTGGGAAACCTGCTGGGAAGAAGAGGCGTGGCACTCTAGTATTAAACAAGTCAGAAGGGTCTGCTGAAGAGGGAAAGGAAAATGAGTCACCTAATGGTGAAAAACACAGTGAAATGCTGGCTTGTAACTCCAACTTGACAGTAAGGAAGAGTGATGAAACAACTGTGGGTACAAATCCCTTGCAAGTCAAACATGATCCTGCATGGTTTTTACTTAGTGGGCATAAGCTGCAGAGAAAAGAGTTCCAAAAGGTCATTAGGAACCTAAAAGGAAAGCTATGCCGAGATTCTCACCAATGGTCATACCAGGCAACACATTTCATTGTTCCTGATCCACTTCGCAGAACAGAAAAATTCTTTGCTGCTGCAGCGTCTGGGAGGTGGATTCTAAAAACTGATTACCTAACAGCAAGCAGCCAGGCTGGAAGGTTTTTACCTGAAGAGGCTTATGAATGGCACAAGAATGGCCTCAGTGAAGATGGTGCAATTAATCTCGAGGCTCCAAGGAAATGGCGCCTTCTTAGGGAGAAAACAGGTCATGGTGTCTTCTGTGGCATGCGCATTATCGTATATGGAGAATGCATTGCTCCACCTTTGGATACTTTGAAGCGTGTTGTAAAGGCTGGAGATGGAACAATTTTAGCAACTTCCCCACCTTACACACGTTTCCTCAAATCAGGGGTTGATTTTGCCATTGTTAGCCCTGGCATGCCACGTGTGGATGTGTGGGTTCAAGAGTTCCTCAGGCATGAAATACCATGTGTGTTAGCTGATTATTTAGTGGAGTATGTGTGCAAACCTGGTTACTCTCTCGACAAACATGTTCAGTACAACACCCACGAATGGGCTGCCAAGTCATTCTCAAAGCTAAGCAGCTTGTCAGAAGAGTGTGTAACTGATGTCGCCACCCCAGATAATCAGGTTAGCGATGACTTAGCATGTCAAGTTTGTGGTTCAAGTGATAGAGCAGACGTAATGTTGGTCTGTGGAGATGAGAGCGGATCCACTGGTTGTGGAATCGGAACTCACATTGATTGTTGTGATCCTCCACTTGAGGATGTTCCCGAAGAAGACTGGTTCTGTCCCAAGTGTTCCGAGTCTAGAAAAAACCCAAATGGAAAGACCAAGAAAAAGGCAGCTTCAAGGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_80439.p1 GENE.R_Transcript_80439~~R_Transcript_80439.p1 ORF type:complete len:1387 (+),score=347.01,PTCB-BRCT|PF12738.3|0.015,PTCB-BRCT|PF12738.3|3.1e-16,PTCB-BRCT|PF12738.3|43,BRCT|PF00533.22|0.047,BRCT|PF00533.22|8.7e-05,BRCT|PF00533.22|9.1e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|3.5e-08,BRCT_2|PF16589.1|4.5e+03,BRCT_2|PF16589.1|0.67,BRCT_2|PF16589.1|0.79,BRCT_2|PF16589.1|21 R_Transcript_80439:207-4367(+)
MQGGSNRLNPFSEVRFCLSGFDLDQHTEVKTELVRVGAVFVPQYGPKCTHVIVHNLTIDDPICVRAMKDKKVLVTSLWVDHSLEAGAPWDTNGIIYRPPKDLNGIPGAQEFVISLTNFQRPLRDDVMTMVSLMGAEFSRSLNPMSATHLVCYNFEGEKYIVAKKFPRIKVVNHRWLEDCLKAWKILPEEQYSKSSYELEMMEAVVKDSQEETGDVAESLTEGQNINAISNLQCEMGGLQPHSVTSSKVTGPCTLEKVPNSGSVVETQFPFKEKPRSNQALKSRNLNQMDQCFPRPSVHQDQEDAKSYSVYAPNVFLSSDQIGNEPPSTSGNGEVLVNSEAGKLADLSCSKKTPTRDSSFSLHVGEDLGSISKESSKRLADFNNGKCSPAGSSKSPKSTPSLQTAQKLGNPDGRWEQNLAADVNSDLCNSNLESGTKKGVSACVGLSTTKQLGDSGPRKRSPLSSRRSSLCLQNAERSGSDGKLQENLAQQVVNICSSDQGLANDKVAPGRVGLSSVGAGSVDGKGPGSLLSEKRKVDDHSNVSYDTPKSQKLATSASKRIDATEPTSPVSSPLEKGGLVSLNPSNDNVDETAKLSSPEISPPNVSSVKSKAKNSVASRNLTSEMLQGIKSTSLAGMANPNTSNFAMSASPGISNKKAAEPQQQMISSGTKDLEMAKSASPKLNADDQTNSSIPKPTRKKTVARKTLGSRPKLTKRSAATQKVSSSFQDDAAMQSVGRMEDNHAASFTPDKLMTDAPTVDAAAVNMGPIPVINSGNEANDCLGPLEDETEAQPELNVQNEKPVIGNTSRLAENRFTVEAEATLSSSDKLCKQRVPAAETGNKKQKLATQKKGVSGKTKKKTALAAKESPDGADEEVGVESSKETVTEKQQVVCAPGKNRCGTSDGAVEVEKDTKSIVGNDQGKSMVGKHTGKLAGKKRRGTLLLNKSEGPVEVEGENETNLGRAEGKGKDERHNLADKSNLTQEPVEADRENCSIVNIDQGTSKGGKPAGKKRRGTLVLNKSEGSAEEGKENESPNGEKHSEMLACNSNLTVRKSDETTVGTNPLQVKHDPAWFLLSGHKLQRKEFQKVIRNLKGKLCRDSHQWSYQATHFIVPDPLRRTEKFFAAAASGRWILKTDYLTASSQAGRFLPEEAYEWHKNGLSEDGAINLEAPRKWRLLREKTGHGVFCGMRIIVYGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLKSGVDFAIVSPGMPRVDVWVQEFLRHEIPCVLADYLVEYVCKPGYSLDKHVQYNTHEWAAKSFSKLSSLSEECVTDVATPDNQVSDDLACQVCGSSDRADVMLVCGDESGSTGCGIGTHIDCCDPPLEDVPEEDWFCPKCSESRKNPNGKTKKKAASRN*

Click here to download the sequence:
Link to NCBI Protein BLAST